RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 NHSL1Q5SYE7 1610 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 LRPAP1P30533 357 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 CASP2P42575 452 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 FRG1Q14331 258 aaKnown RBP11.77□□□□□ -0.53
SCN4B-202ENST00000415030 RFTN1Q14699 578 aaPredicted RBP11.77□□□□□ -0.53
SCN4B-202ENST00000415030 ARL13AQ5H913 290 aaPredicted RBP11.77□□□□□ -0.53
SCN4B-202ENST00000415030 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
SCN4B-202ENST00000415030 EFCAB12Q6NXP0 572 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 ANKRD52Q8NB46 1076 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 RSPH1Q8WYR4 309 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 CDCA5Q96FF9 252 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 OR52B2Q96RD2 323 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 VAT1Q99536 393 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 ADNPQ9H2P0 1102 aa11.77□□□□□ -0.53
SCN4B-202ENST00000415030 ALDOAP04075 364 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 DEFB115Q30KQ5 88 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 ZBED5Q49AG3 693 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 AFG1LQ8WV93 481 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 CEP41Q9BYV8 373 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 POLR1BQ9H9Y6 1135 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PLEKHA5Q9HAU0 1116 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 VPS28Q9UK41 221 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 AAR2Q9Y312 384 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 TCRBV5S1A1TA0A578 114 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PAPSS1O43252 624 aaPredicted RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 HUS1O60921 280 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 TOP3BO95985 862 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 SLC7A1P30825 629 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PTPN9P43378 593 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 METTL7BQ6UX53 244 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 OR6J1Q8NGC5 347 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 LRRN4Q8WUT4 740 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 LPGAT1Q92604 370 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 ATP6V1E2Q96A05 226 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 P2RY11Q96G91 374 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 CIB1Q99828 191 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 WDR83Q9BRX9 315 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PPP2R3BQ9Y5P8 575 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 ANXA9O76027 345 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 NFICP08651 508 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 CDK4P11802 303 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 ATP5F1P24539 256 aaPredicted RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 BNIP2Q12982 314 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 STEAP4Q687X5 459 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 FSTL4Q6MZW2 842 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 SH2D5Q6ZV89 423 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 TMCO5AQ8N6Q1 288 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PACRGLQ8N7B6 248 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 RNF139Q8WU17 664 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 GTF3C2Q8WUA4 911 aaPredicted RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 OSCP1Q8WVF1 389 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 MARK4Q96L34 752 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 LGMNQ99538 433 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 MAGEB5Q9BZ81 275 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 MTF2Q9Y483 593 aaPredicted RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PHGDHO43175 533 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 TGFB3P10600 412 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 CDH3P22223 829 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 GRIA3P42263 894 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 ARPP19P56211 112 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 SPIDRQ14159 915 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 DPYSL2Q16555 572 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 DDIASQ8IXT1 998 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 LRTOMTQ8WZ04 291 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 PEBP4Q96S96 227 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 CDT1Q9H211 546 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 RHOJQ9H4E5 214 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 NOL11Q9H8H0 719 aaKnown RBP11.76□□□□□ -0.53
SCN4B-202ENST00000415030 OXSMQ9NWU1 459 aa11.76□□□□□ -0.53
SCN4B-202ENST00000415030 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.75□□□□□ -0.53
SCN4B-202ENST00000415030 A0A087X1B8 175 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 SH3PXD2BA1X283 911 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 SYCE1LA8MT33 242 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 GSTA4O15217 222 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 ALOX15P16050 662 aaPredicted RBP11.75□□□□□ -0.53
SCN4B-202ENST00000415030 CDH2P19022 906 aaPredicted RBP11.75□□□□□ -0.53
SCN4B-202ENST00000415030 L1CAMP32004 1257 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 SLC26A2P50443 739 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 FBXL19Q6PCT2 694 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 CLEC4FQ8N1N0 589 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 PQLC3Q8N755 202 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 ZNF555Q8NEP9 628 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 HSPBAP1Q96EW2 488 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 MAF1Q9H063 256 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 PDLIM7Q9NR12 457 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 COL2A1P02458 1487 aaPredicted RBP11.75□□□□□ -0.53
SCN4B-202ENST00000415030 CCDC78A2IDD5 438 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 M0QYT0 321 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 TBC1D4O60343 1298 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 HOXC6P09630 235 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 POLD2P49005 469 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 SH3PXD2AQ5TCZ1 1133 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
SCN4B-202ENST00000415030 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms