RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TBC1D3KA0A087X1G2 549 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 LNP1A1A4G5 178 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 TBC1D3FA6NER0 549 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 TBC1D3LB9A6J9 549 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 AKR1B15C9JRZ8 316 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 PRAMEF26H0Y7S4 382 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 H3BRJ5 948 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 I6L893 689 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 CBX4O00257 560 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 CDX4O14627 284 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 PLRG1O43660 514 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 AKR1B10O60218 316 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 RNASEH2AO75792 299 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 GYPCP04921 128 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 TBC1D3HP0C7X1 549 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 HLA-EP13747 358 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ENGP17813 658 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ITPKAP23677 461 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 CASP14P31944 242 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ACSL1P33121 698 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 SERPINB6P35237 376 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 HADHBP55084 474 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 TPI1P60174 286 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 IL10RBQ08334 325 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 DPYSL2Q16555 572 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 INAVAQ3KP66 663 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 SETMARQ53H47 684 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 TBC1D3GQ6DHY5 549 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 TBC1D3CQ6IPX1 549 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 KIAA1161Q6NSJ0 714 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ERN2Q76MJ5 926 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 BZW1Q7L1Q6 419 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 POLNQ7Z5Q5 900 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 MMAAQ8IVH4 418 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 SLC41A1Q8IVJ1 513 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 VSTM4Q8IW00 320 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 RAVER1Q8IY67 606 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 TBC1D3Q8IZP1 549 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 STK40Q8N2I9 435 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 OR2AP1Q8NGE2 309 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 OR2A12Q8NGT7 310 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 PIP4K2CQ8TBX8 421 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 CPLX3Q8WVH0 158 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 FATE1Q969F0 183 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 BIRC7Q96CA5 298 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ZNF653Q96CK0 615 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 MYEOVQ96EZ4 313 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 MRFAP1L1Q96HT8 127 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ZNF641Q96N77 438 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 TUBGCP5Q96RT8 1024 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 PSMB7Q99436 277 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 CDC6Q99741 560 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 SPON2Q9BUD6 331 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 EDEM2Q9BV94 578 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 C1QTNF7Q9BXJ2 289 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ADAM33Q9BZ11 813 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 NEUROG2Q9H2A3 272 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 ANLNQ9NQW6 1124 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 TMEM74BQ9NUR3 256 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 POLR3BQ9NW08 1133 aaPredicted RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 DKK3Q9UBP4 350 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 IL36AQ9UHA7 158 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 AP4E1Q9UPM8 1137 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 INVSQ9Y283 1065 aa6.52□□□□□ -1.37
USP54-202ENST00000413442 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.52□□□□□ -1.37
USP54-202ENST00000413442 NYNRINQ9P2P1 1898 aaKnown RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 A0A087X0T9 212 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 A0A0D9SEW6 157 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 ANTXRLA6NF34 631 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 TMCO5BA8MYB1 307 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 EEF2KO00418 725 aaKnown RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 MID1O15344 667 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 BUB1O43683 1085 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 CREB3O43889 395 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 PCDHGA12O60330 932 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 LRCH4O75427 683 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 ZNF189O75820 626 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 MTA2O94776 668 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 CFIP05156 583 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 TMEM253P0C7T8 217 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 FAM228BP0C875 321 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 SKILP12757 684 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 KRT10P13645 584 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 ITGB7P26010 798 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 CD38P28907 300 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 MIPP30301 263 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 MAN1A1P33908 653 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 CTSOP43234 321 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 RXRGP48443 463 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 ARRB1P49407 418 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 NEK3P51956 506 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 RPS21P63220 83 aaKnown RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 ELP6Q0PNE2 266 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 TBX2Q13207 712 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 STAT4Q14765 748 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 SF3A2Q15428 464 aaKnown RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 ASTE1Q2TB18 679 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 MYLK3Q32MK0 819 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms