RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 AQP5P55064 265 aa8.52□□□□□ -1.05
SCN9A-203ENST00000409672 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
SCN9A-203ENST00000409672 CDC73Q6P1J9 531 aa8.52□□□□□ -1.05
SCN9A-203ENST00000409672 WDR49Q8IV35 697 aa8.52□□□□□ -1.05
SCN9A-203ENST00000409672 ATXN2Q99700 1313 aaKnown RBP8.52□□□□□ -1.05
SCN9A-203ENST00000409672 CDK12Q9NYV4 1490 aaPredicted RBP8.52□□□□□ -1.05
SCN9A-203ENST00000409672 CLASP1Q7Z460 1538 aa8.52□□□□□ -1.05
SCN9A-203ENST00000409672 TISP43B9A030 160 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 E5RJQ4 531 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TIMM44O43615 452 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CDH16O75309 829 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TSPAN19P0C672 248 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SLC35G4P0C7Q5 338 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 NR1I3Q14994 352 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TMEM132CQ8N3T6 1108 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SUN3Q8TAQ9 357 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SMG7Q92540 1137 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 NSL1Q96IY1 281 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 MARCH7Q9H992 704 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SLC27A6Q9Y2P4 619 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ARIH1Q9Y4X5 557 aaPredicted RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ANKRD12Q6UB98 2062 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 H3BSH0 61 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 MDM4O15151 490 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 RAB27AP51159 221 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ALX1Q15699 326 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 KCNA10Q16322 511 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 PSMD5Q16401 504 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ATAT1Q5SQI0 421 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TREML2Q5T2D2 321 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TRIQKQ629K1 86 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 LINGO4Q6UY18 593 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 RNF145Q96MT1 663 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ALG9Q9H6U8 611 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 KCND2Q9NZV8 630 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 MARK1Q9P0L2 795 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CFAP97Q9P2B7 532 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CAMSAP1Q5T5Y3 1602 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 PHGDHO43175 533 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SLC28A2O43868 658 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 AOC2O75106 756 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 PIAS1O75925 651 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 EPN2O95208 641 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 NOGQ13253 232 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ITGA9Q13797 1035 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TMC5Q6UXY8 1006 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 FAM98AQ8NCA5 519 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ATP8B4Q8TF62 1192 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 MYLPFQ96A32 169 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TEKT5Q96M29 485 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ATP13A3Q9H7F0 1226 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DMGDHQ9UI17 866 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DRG1Q9Y295 367 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 MTO1Q9Y2Z2 717 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 KRT6AP02538 564 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 KRT6BP04259 564 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 KRT6CP48668 564 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CCNYL2Q5T2Q4 361 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 FAM220AQ7Z4H9 259 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 PHYKPLQ8IUZ5 450 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 EID3Q8N140 333 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CNOT6Q9ULM6 557 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TSC22D4Q9Y3Q8 395 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 MROH7Q68CQ1 1323 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 A0A087X0B3 334 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 A0A1B0GW55 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 GLRA3O75311 464 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 FBXO21O94952 628 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 HMGCRP04035 888 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DUX4L2P0CJ85 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DUX4L3P0CJ86 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DUX4L4P0CJ87 422 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DUX4L5P0CJ88 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DUX4L6P0CJ89 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DUX4L7P0CJ90 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TMEM138Q9NPI0 162 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 RHBDL2Q9NX52 303 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DUX4Q9UBX2 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 BTRCQ9Y297 605 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SLC9A3R1O14745 358 aaPredicted RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 GNB5O14775 395 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TRAPPC6AO75865 159 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 IFNA14P01570 189 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 GDI2P50395 445 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 NEDD8Q15843 81 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 SBK1Q52WX2 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 RSBN1Q5VWQ0 802 aaPredicted RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TOP1MTQ969P6 601 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 GRAMD1AQ96CP6 724 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 C5orf34Q96MH7 638 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 KLHL31Q9H511 634 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CACNG4Q9UBN1 327 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 VIPP01282 170 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 PTPN1P18031 435 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 GSTM5P46439 218 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ESRP1Q6NXG1 681 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 FOXP3Q9BZS1 431 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ACSS2Q9NR19 701 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms