RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 GPR20Q99678 358 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 MRPL57Q9BQC6 102 aaKnown RBP13.23□□□□□ -0.29
GREB1-206ENST00000396123 SNX15Q9NRS6 342 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 RHBDL2Q9NX52 303 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 SLC17A7Q9P2U7 560 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 TFEBP19484 476 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 SOX6P35712 828 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 ALDH6A1Q02252 535 aaKnown RBP13.23□□□□□ -0.29
GREB1-206ENST00000396123 SLC25A52Q3SY17 297 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 STXBP5Q5T5C0 1151 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 TSHZ1Q6ZSZ6 1077 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 XYLT1Q86Y38 959 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 SYTL1Q8IYJ3 562 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 TSPAN18Q96SJ8 248 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 SEMA6AQ9H2E6 1030 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 KRT84Q9NSB2 600 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 DMAC2Q9NW81 257 aa13.23□□□□□ -0.29
GREB1-206ENST00000396123 KRT36O76013 467 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 FGFR1P11362 822 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SLC44A4Q53GD3 710 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 NECAB2Q7Z6G3 386 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 MED8Q96G25 268 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 FAM192AQ9GZU8 254 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 USE1Q9NZ43 259 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 COPG2Q9UBF2 871 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 IPPQ9Y573 584 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SPACA6W5XKT8 324 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 CLDN5O00501 218 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 CILPO75339 1184 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 LRCH4O75427 683 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SNUPNO95149 360 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 AIF1P55008 147 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SQLEQ14534 574 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 TTC27Q6P3X3 843 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 C16orf59Q7L2K0 433 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 ITFG1Q8TB96 612 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SPPL2AQ8TCT8 520 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 NIFKQ9BYG3 293 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 FAM126AQ9BYI3 521 aaPredicted RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 AHSPQ9NZD4 102 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 ZMPSTE24O75844 475 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 ALDH1A2O94788 518 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SNRPB2P08579 225 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 IMPDH2P12268 514 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
GREB1-206ENST00000396123 PLD1Q13393 1074 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 LIPMQ5VYY2 423 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 APTXQ7Z2E3 356 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 GPR142Q7Z601 462 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 TNS4Q8IZW8 715 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 RP9Q8TA86 221 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 ACTRT2Q8TDY3 377 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SLC44A1Q8WWI5 657 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 TMEM109Q9BVC6 243 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 ZC4H2Q9NQZ6 224 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 FBXO5Q9UKT4 447 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 ATXN2Q99700 1313 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 H3BMM5 538 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 BUD23O43709 281 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 DGKAP23743 735 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 S100A3P33764 101 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 CDKN2BP42772 138 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 PSEN1P49768 467 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 HK2P52789 917 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 SLC16A1P53985 500 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 UBAP2LQ14157 1087 aaKnown RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 CCDC142Q17RM4 750 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 TREML2Q5T2D2 321 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 TMEM132CQ8N3T6 1108 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 C12orf50Q8NA57 414 aaPredicted RBP13.22□□□□□ -0.29
GREB1-206ENST00000396123 TRPM4Q8TD43 1214 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 ZNF384Q8TF68 577 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 OMDQ99983 421 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 MECRQ9BV79 373 aa13.22□□□□□ -0.29
GREB1-206ENST00000396123 KRT87PA6NCN2 255 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 GSNP06396 782 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 CCDC159P0C7I6 412 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 KRT20P35900 424 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 SH3BP5LQ7L8J4 393 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 FAM35AQ86V20 835 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 ZDHHC13Q8IUH4 622 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 MAGED4Q96JG8 741 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 SERAC1Q96JX3 654 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 MARK4Q96L34 752 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 DHX33Q9H6R0 707 aaKnown RBP13.21□□□□□ -0.29
GREB1-206ENST00000396123 PALMDQ9NP74 551 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 ARL2P36404 184 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 HADHBP55084 474 aaKnown RBP13.21□□□□□ -0.29
GREB1-206ENST00000396123 BTG3Q14201 252 aaPredicted RBP13.21□□□□□ -0.29
GREB1-206ENST00000396123 POTEHQ6S545 545 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 PLEKHM3Q6ZWE6 761 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 TRMT11Q7Z4G4 463 aaKnown RBP13.21□□□□□ -0.29
GREB1-206ENST00000396123 PPTC7Q8NI37 304 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 B3GNT5Q9BYG0 378 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 ZCCHC2Q9C0B9 1178 aaKnown RBP13.21□□□□□ -0.29
GREB1-206ENST00000396123 COL20A1Q9P218 1284 aa13.21□□□□□ -0.29
GREB1-206ENST00000396123 PCDHGC3Q9UN70 934 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms