RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CDY2AQ9Y6F7 541 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 CDY1Q9Y6F8 540 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 CCND3P30281 292 aaPredicted RBP15.44■□□□□ 0.06
MSH5-203ENST00000375750 ARL4AP40617 200 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 NME3Q13232 169 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 MAP3K21Q5TCX8 1036 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 CYS1Q717R9 158 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 AMIGO2Q86SJ2 522 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 DNAAF3Q8N9W5 541 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 FAM81AQ8TBF8 368 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 TMA16Q96EY4 203 aaKnown RBP15.44■□□□□ 0.06
MSH5-203ENST00000375750 CCDC28BQ9BUN5 200 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 IARS2Q9NSE4 1012 aaKnown RBP15.44■□□□□ 0.06
MSH5-203ENST00000375750 STK39Q9UEW8 545 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 FIS1Q9Y3D6 152 aa15.44■□□□□ 0.06
MSH5-203ENST00000375750 RECQL4O94761 1208 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 PIGNO95427 931 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 HOXC8P31273 242 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 NDUFV1P49821 464 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 SULT1E1P49888 294 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 IFRD2Q12894 506 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 NRF1Q16656 503 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 DCAF6Q58WW2 860 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 ARL13AQ5H913 290 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 CTU1Q7Z7A3 348 aaKnown RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 URGCPQ8TCY9 931 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 CENPIQ92674 756 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 WNT8BQ93098 351 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 MTG1Q9BT17 334 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 NMRAL1Q9HBL8 299 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 RIMS3Q9UJD0 308 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 GRID2O43424 1007 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 TRIM13O60858 407 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 ALDH1A1P00352 501 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 SBK3P0C264 359 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 MLNP12872 115 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 ZFXP17010 805 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 PTPN1P18031 435 aaKnown RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 FGFR3P22607 806 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 CRYBB1P53674 252 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 NAGLUP54802 743 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 ADGRE1Q14246 886 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 GDF6Q6KF10 455 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 C4orf22Q6V702 233 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 MARVELD2Q8N4S9 558 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 KYQ8NBH2 561 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 DGCR14Q96DF8 476 aaKnown RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 SNX27Q96L92 541 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 CPNE1Q99829 537 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 OMDQ99983 421 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 KLHL8Q9P2G9 620 aaPredicted RBP15.43■□□□□ 0.06
MSH5-203ENST00000375750 ATXN10Q9UBB4 475 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 FZD10Q9ULW2 581 aa15.43■□□□□ 0.06
MSH5-203ENST00000375750 ZCWPW2A0A1B0GU75 182 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 SEPT4O43236 478 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 MYL4P12829 197 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 HDCP19113 662 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 PTPN9P43378 593 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 GRIA4P48058 902 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 NOGQ13253 232 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 DBN1Q16643 649 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 INSCQ1MX18 579 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 GRTP1Q5TC63 336 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 BNC2Q6ZN30 1099 aaPredicted RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 BTBD9Q96Q07 612 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 FERMT1Q9BQL6 677 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 TASP1Q9H6P5 420 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 ANLNQ9NQW6 1124 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 SNX10Q9Y5X0 201 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 H3BSA7 217 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 CLDN5O00501 218 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 CSPG5O95196 566 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 GARSP41250 739 aaKnown RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 RPL5P46777 297 aaKnown RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 SERPINB8P50452 374 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 LIMK2P53671 638 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 XIAPP98170 497 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 SP3Q02447 781 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 GRM3Q14832 879 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 CYTH1Q15438 398 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 CCDC153Q494R4 210 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 PIGGQ5H8A4 983 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 UBXN11Q5T124 520 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 SYPL2Q5VXT5 272 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 ALKAL1Q6UXT8 129 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 RPS27LQ71UM5 84 aaKnown RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 PCDH20Q8N6Y1 951 aaKnown RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 PNPLA1Q8N8W4 532 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 RNF169Q8NCN4 708 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 SLC2A14Q8TDB8 520 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 RNF139Q8WU17 664 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 KBTBD7Q8WVZ9 684 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 SGF29Q96ES7 293 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 CAPNS2Q96L46 248 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 ZNF512Q96ME7 567 aaPredicted RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 LIN28AQ9H9Z2 209 aaKnown RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 PLEKHA5Q9HAU0 1116 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 C20orf96Q9NUD7 363 aaPredicted RBP15.42■□□□□ 0.06
MSH5-203ENST00000375750 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.06
MSH5-203ENST00000375750 GTF2IRD1Q9UHL9 959 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms