RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CCND1P24385 295 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 MPSTP25325 297 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 DSC2Q02487 901 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 GALNT2Q10471 571 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 DUSP4Q13115 394 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 SEMA3BQ13214 749 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 ZNF789Q5FWF6 425 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 NAPEPLDQ6IQ20 393 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 DCLRE1AQ6PJP8 1040 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
PDE6C-201ENST00000371447 DEFB128Q7Z7B8 93 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 PSMG2Q969U7 264 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 NTAN1Q96AB6 310 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 RBBP8Q99708 897 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 TBL1YQ9BQ87 522 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 PEX11AO75192 247 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 IRF1P10914 325 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 MLNP12872 115 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 EPHA3P29320 983 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 SLC12A2P55011 1212 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 CCL23P55773 120 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 HTRA3P83110 453 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 MGAT3Q09327 533 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 TAF10Q12962 218 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 SPANXN3Q5MJ09 141 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 FAM171BQ6P995 826 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 PRSS55Q6UWB4 352 aaPredicted RBP11.94□□□□□ -0.5
PDE6C-201ENST00000371447 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 RNF180Q86T96 592 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 DBF4BQ8NFT6 615 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 HMCESQ96FZ2 354 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 SCLYQ96I15 445 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 CPNE1Q99829 537 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 NUF2Q9BZD4 464 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 SP110Q9HB58 689 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 NMRAL1Q9HBL8 299 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 STARD7Q9NQZ5 370 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 ABCC13Q9NSE7 274 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 DCDC2Q9UHG0 476 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 CRYL1Q9Y2S2 319 aa11.94□□□□□ -0.5
PDE6C-201ENST00000371447 TMEM233B4DJY2 109 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 CFLARO15519 480 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PROCP04070 461 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 CSHL1Q14406 222 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 ACSBG2Q5FVE4 666 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PHTF2Q8N3S3 785 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PDCD6IPQ8WUM4 868 aaKnown RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 HDAC11Q96DB2 347 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PHF21BQ96EK2 531 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 SMIM14Q96QK8 99 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 SLC9A7Q96T83 725 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 WASF2Q9Y6W5 498 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 C5orf42Q9H799 3197 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 KPNA6O60684 536 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 GSRP00390 522 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 HNRNPLP14866 589 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 TBX4P57082 545 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PIK3R6Q5UE93 754 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 C1orf146Q5VVC0 180 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 TMEM198Q66K66 360 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 ISLR2Q6UXK2 745 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 TMEM173Q86WV6 379 aaPredicted RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 ARHGAP12Q8IWW6 846 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 BLOC1S5Q8TDH9 187 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 NXNL1Q96CM4 212 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 CCSER2Q9H7U1 834 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 GLOD4Q9HC38 313 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 C15orf41Q9Y2V0 281 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 TSPAN3O60637 253 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PQBP1O60828 265 aaKnown RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 USP1O94782 785 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 ALDH1A2O94788 518 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 SERPINE1P05121 402 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 CALB2P22676 271 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 CCNFP41002 786 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 SERPINB8P50452 374 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 WNT3AP56704 352 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 SP3Q02447 781 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 TCHHL1Q5QJ38 904 aaPredicted RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 GRTP1Q5TC63 336 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 KYAT3Q6YP21 454 aaKnown RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PTCD3Q96EY7 689 aaKnown RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 RSRC1Q96IZ7 334 aaKnown RBP11.93□□□□□ -0.5
PDE6C-201ENST00000371447 NAT9Q9BTE0 207 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PPP1R12CQ9BZL4 782 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 RNPEPL1Q9HAU8 725 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 CASS4Q9NQ75 786 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 PLA2G4CQ9UP65 541 aa11.93□□□□□ -0.5
PDE6C-201ENST00000371447 ZNF487B1APH4 448 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 AIM2O14862 343 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 NCAM2O15394 837 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 MAFKO60675 156 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 GABRB3P28472 473 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 HOXC8P31273 242 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 KCNQ1P51787 676 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 LIMK2P53671 638 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms