RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TBCDQ9BTW9 1192 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 SPAG4Q9NPE6 437 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 SEMA4BQ9NPR2 832 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 DAPK2Q9UIK4 370 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 PCDHGC3Q9UN70 934 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 NWD2Q9ULI1 1742 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 NR4A1P22736 598 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 SERPINB1P30740 379 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 RABGGTBP53611 331 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 WNT7BP56706 349 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 FRG1Q14331 258 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 HERC6Q8IVU3 1022 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 MAML3Q96JK9 1138 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 LIN28AQ9H9Z2 209 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 PRPF19Q9UMS4 504 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 TDRKHQ9Y2W6 561 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 CKMT2P17540 419 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 NOS2P35228 1153 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 THOP1P52888 689 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 MAXP61244 160 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 GRM3Q14832 879 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 NR6A1Q15406 480 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 CCDC85BQ15834 202 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 WSCD1Q658N2 575 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 CAMK1DQ8IU85 385 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 ZDHHC17Q8IUH5 632 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 DNAJB3Q8WWF6 145 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 NXNL1Q96CM4 212 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 PLEKHG4BQ96PX9 1271 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 STN1Q9H668 368 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 POPDC2Q9HBU9 364 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 PREBQ9HCU5 417 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 TYW5A2RUC4 315 aaKnown RBP14.08□□□□□ -0.15
COL6A1-201ENST00000361866 NCAM2O15394 837 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 RNASEH1O60930 286 aaKnown RBP14.08□□□□□ -0.15
COL6A1-201ENST00000361866 ARL2P36404 184 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 HEATR4Q86WZ0 1026 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 LRTOMTQ8WZ04 291 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 SKA1Q96BD8 255 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 BRD8Q9H0E9 1235 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 RIC8BQ9NVN3 520 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 SLC30A1Q9Y6M5 507 aa14.08□□□□□ -0.15
COL6A1-201ENST00000361866 NEMP2A6NFY4 417 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 FARP2O94887 1054 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-201ENST00000361866 IL5RAQ01344 420 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 NADK2Q4G0N4 442 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 FNDC5Q8NAU1 212 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 BCLAF3A2AJT9 711 aaKnown RBP14.08□□□□□ -0.16
COL6A1-201ENST00000361866 ZBTB24O43167 697 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-201ENST00000361866 B4GALT4O60513 344 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 TADA2AO75478 443 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 SOAT2O75908 522 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 CABYRO75952 493 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 GNAZP19086 355 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 RPS12P25398 132 aaKnown RBP14.08□□□□□ -0.16
COL6A1-201ENST00000361866 PSMB9P28065 219 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 CRABP2P29373 138 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 SLC26A2P50443 739 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 IRF9Q00978 393 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 P3H2Q8IVL5 708 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 TRPC4APQ8TEL6 797 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 PPP1R10Q96QC0 940 aaKnown RBP14.08□□□□□ -0.16
COL6A1-201ENST00000361866 KCTD15Q96SI1 283 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-201ENST00000361866 ROGDIQ9GZN7 287 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 PALMDQ9NP74 551 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 DTLQ9NZJ0 730 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 FBXO5Q9UKT4 447 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 AKAP11Q9UKA4 1901 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 C4AP0C0L4 1744 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 C4BP0C0L5 1744 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-201ENST00000361866 NFASCO94856 1347 aa14.08□□□□□ -0.16
COL6A1-201ENST00000361866 ZNF189O75820 626 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 DLGAP3O95886 979 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ATP5F1P24539 256 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 GPD2P43304 727 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 PGGT1BP53609 377 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 FKBP1AP62942 108 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 LCLAT1Q6UWP7 414 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 OTOP3Q7RTS5 596 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ANKRD52Q8NB46 1076 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 TNIP2Q8NFZ5 429 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 PDGFCQ9NRA1 345 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 STK39Q9UEW8 545 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CCL22O00626 93 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 GRIN3BO60391 1043 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CCR3P51677 355 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 GRIK4Q16099 956 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 PTRHD1Q6GMV3 140 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 TAF2Q6P1X5 1199 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 PIWIL4Q7Z3Z4 852 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 LDB1Q86U70 411 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 TBL1YQ9BQ87 522 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 RERGLQ9H628 205 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 TRHDEQ9UKU6 1024 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms