RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 RAMP2O60895 175 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SPAG6O75602 509 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SERPINB4P48594 390 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 PRMT2P55345 433 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CHI3L2Q15782 390 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 STXBP5Q5T5C0 1151 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 ZNF449Q6P9G9 518 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SH2D5Q6ZV89 423 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 DCLK2Q8N568 766 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 NAT14Q8WUY8 206 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CDKL2Q92772 493 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 PRR11Q96HE9 360 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 BTN2A3PQ96KV6 586 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 TRIM62Q9BVG3 475 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CCDC134Q9H6E4 229 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 LRRC40Q9H9A6 602 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 HAUS2Q9NVX0 235 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SENP1Q9P0U3 644 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SLC39A10Q9ULF5 831 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 NUMBLQ9Y6R0 609 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 HOXA2O43364 376 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 RTN3O95197 1032 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 ZWINTO95229 277 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CXCL10P02778 98 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SYN1P17600 705 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 TACR2P21452 398 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CORO1AP31146 461 aaKnown RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 ATP5C1P36542 298 aaKnown RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 MAGEA11P43364 429 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 PDE1CQ14123 709 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 TRIP4Q15650 581 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 C4orf22Q6V702 233 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 PGBD5Q8N414 524 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 PDCD6IPQ8WUM4 868 aaKnown RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CCT6BQ92526 530 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 LRRC39Q96DD0 335 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SHCBP1LQ9BZQ2 653 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CASS4Q9NQ75 786 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 FGF10O15520 208 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SUN1O94901 812 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CCNCP24863 283 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 WNT3AP56704 352 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 COG7P83436 770 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 N4BP2L1Q5TBK1 243 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 MARC1Q5VT66 337 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 ARL14EPQ8N8R7 260 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 C20orf27Q9GZN8 174 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 SUDS3Q9H7L9 328 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-202ENST00000356141 MTRRQ9UBK8 725 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 YIPF1Q9Y548 306 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CBX4O00257 560 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 ALDH1A3P47895 512 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 NEK3P51956 506 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 CDH17Q12864 832 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 RAPH1Q70E73 1250 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 TOP1MTQ969P6 601 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 MRGPRX2Q96LB1 330 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 PPP1R36Q96LQ0 422 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 ZNF558Q96NG5 402 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 FRMD8Q9BZ67 464 aaPredicted RBP17.89■□□□□ 0.45
NPAS3-202ENST00000356141 CXXC1Q9P0U4 656 aaPredicted RBP17.89■□□□□ 0.45
NPAS3-202ENST00000356141 TRHDEQ9UKU6 1024 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 ZNF840PA6NDX5 716 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 WDR5P61964 334 aaKnown RBP17.89■□□□□ 0.45
NPAS3-202ENST00000356141 ELAVL2Q12926 359 aaKnown RBP17.89■□□□□ 0.45
NPAS3-202ENST00000356141 FSTL4Q6MZW2 842 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 OR6K2Q8NGY2 324 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 DPF3Q92784 378 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 TMEM237Q96Q45 408 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 NDNQ99608 321 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 ZBED2Q9BTP6 218 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 PHACTR1Q9C0D0 580 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 SLC24A3Q9HC58 644 aa17.89■□□□□ 0.45
NPAS3-202ENST00000356141 UXTQ9UBK9 157 aaPredicted RBP17.89■□□□□ 0.45
NPAS3-202ENST00000356141 GREB1Q4ZG55 1949 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 FAM237BA0A1B0GVD1 139 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 F5H5T6 163 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 COL6A1P12109 1028 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 HMGA1P17096 107 aaKnown RBP17.88■□□□□ 0.45
NPAS3-202ENST00000356141 ELF1P32519 619 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 SCTRP47872 440 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 LGSNQ5TDP6 509 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 CNKSR3Q6P9H4 555 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 TBC1D1Q86TI0 1168 aaPredicted RBP17.88■□□□□ 0.45
NPAS3-202ENST00000356141 ZNF683Q8IZ20 524 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 ZNF276Q8N554 614 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 DNAJC5GQ8N7S2 189 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 PPP1R14CQ8TAE6 165 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 ERP27Q96DN0 273 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 TSSK1BQ9BXA7 367 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 ZNF334Q9HCZ1 680 aaPredicted RBP17.88■□□□□ 0.45
NPAS3-202ENST00000356141 KLHL14Q9P2G3 628 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 MICAL3Q7RTP6 2002 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 EDF1O60869 148 aaKnown RBP17.88■□□□□ 0.45
NPAS3-202ENST00000356141 PRSS56P0CW18 603 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 MBL2P11226 248 aaPredicted RBP17.88■□□□□ 0.45
NPAS3-202ENST00000356141 ZXDBP98169 803 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 CDK16Q00536 496 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 ZNF789Q5FWF6 425 aa17.88■□□□□ 0.45
NPAS3-202ENST00000356141 NAPEPLDQ6IQ20 393 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms