RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 MARCH2Q9P0N8 246 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 DSEQ9UL01 958 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 PCDHB5Q9Y5E4 795 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 ANKRD12Q6UB98 2062 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 OR51F1A6NGY5 319 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 SNUPNO95149 360 aaKnown RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 C1QAP02745 245 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 ALADP13716 330 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 CYP2C18P33260 490 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 SCNN1AP37088 669 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 DSC2Q02487 901 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 MAPRE1Q15691 268 aaKnown RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 KHDC1Q4VXA5 237 aaKnown RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 RNF43Q68DV7 783 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 ASRGL1Q7L266 308 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 CLNKQ7Z7G1 428 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 DCP1BQ8IZD4 617 aaKnown RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 LRRC39Q96DD0 335 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 HMCESQ96FZ2 354 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 FRMD8Q9BZ67 464 aaPredicted RBP14.13□□□□□ -0.15
TRIM4-201ENST00000349062 TRIM4Q9C037 500 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 PPCSQ9HAB8 311 aa14.13□□□□□ -0.15
TRIM4-201ENST00000349062 AURKAO14965 403 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 BNIP3LO60238 219 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 SP100P23497 879 aaPredicted RBP14.12□□□□□ -0.15
TRIM4-201ENST00000349062 YWHAQP27348 245 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 HOXD10P28358 340 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 SLC18A2Q05940 514 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 THOC5Q13769 683 aaKnown RBP14.12□□□□□ -0.15
TRIM4-201ENST00000349062 RASA2Q15283 850 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 PIK3R6Q5UE93 754 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 NXNQ6DKJ4 435 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 RPS27LQ71UM5 84 aaKnown RBP14.12□□□□□ -0.15
TRIM4-201ENST00000349062 C16orf59Q7L2K0 433 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 GORASP1Q9BQQ3 440 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 GBA3Q9H227 469 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 IRAK4Q9NWZ3 460 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 MOCS1Q9NZB8 636 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 RCOR3Q9P2K3 495 aaPredicted RBP14.12□□□□□ -0.15
TRIM4-201ENST00000349062 TLK1Q9UKI8 766 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 ADAM28Q9UKQ2 775 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 TK2O00142 265 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 NVLO15381 856 aaKnown RBP14.12□□□□□ -0.15
TRIM4-201ENST00000349062 GYG2O15488 501 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 NBNO60934 754 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 MT-CO1P00395 513 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 GP5P40197 560 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 SLC11A1P49279 550 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 GRM3Q14832 879 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 ATG16L1Q676U5 607 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 BLOC1S5Q8TDH9 187 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 NTAN1Q96AB6 310 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 SUDS3Q9H7L9 328 aaPredicted RBP14.12□□□□□ -0.15
TRIM4-201ENST00000349062 CATSPERBQ9H7T0 1116 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 GKN1Q9NS71 199 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 BPTFQ12830 3046 aa14.12□□□□□ -0.15
TRIM4-201ENST00000349062 KIF3CO14782 793 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 KRT36O76013 467 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ALDH1A1P00352 501 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 OR1E1P30953 314 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 OR1D2P34982 312 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 LRRC36Q1X8D7 754 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 RASIP1Q5U651 963 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ZNF470Q6ECI4 717 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 CLPTM1LQ96KA5 538 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 SMIM14Q96QK8 99 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 UPF3AQ9H1J1 476 aaKnown RBP14.11□□□□□ -0.15
TRIM4-201ENST00000349062 KCTD3Q9Y597 815 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 HSPA4LO95757 839 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 TSPAN8P19075 237 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ACVRL1P37023 503 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 COLGALT2Q8IYK4 626 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ZNF276Q8N554 614 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 KCTD4Q8WVF5 259 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 IGSF8Q969P0 613 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 MYEOVQ96EZ4 313 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ELMO2Q96JJ3 720 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 RNF208Q9H0X6 261 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 UNC93B1Q9H1C4 597 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 BPGMP07738 259 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 SERPINB9P50453 376 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ATXN3P54252 364 aaPredicted RBP14.11□□□□□ -0.15
TRIM4-201ENST00000349062 GALNT2Q10471 571 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 CDH17Q12864 832 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 FBXO48Q5FWF7 155 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 SNX30Q5VWJ9 437 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 CCSAPQ6IQ19 270 aaPredicted RBP14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ARCQ7LC44 396 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 ZNF598Q86UK7 904 aaKnown RBP14.11□□□□□ -0.15
TRIM4-201ENST00000349062 FBXO27Q8NI29 283 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 VPS39Q96JC1 886 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 MARK4Q96L34 752 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 TSNARE1Q96NA8 513 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 SLC9A7Q96T83 725 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 TBL1YQ9BQ87 522 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 VCXQ9H320 206 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 CSNK1G1Q9HCP0 422 aa14.11□□□□□ -0.15
TRIM4-201ENST00000349062 TRPC7Q9HCX4 862 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms