RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CHRM5P08912 532 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CD81P60033 236 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAB21L1Q13394 359 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 POLD3Q15054 466 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ATF7IP2Q5U623 682 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PDE12Q6L8Q7 609 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTF1AQ7RTS3 328 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 TICAM1Q8IUC6 712 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 GRIN3AQ8TCU5 1115 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZSWIM3Q96MP5 696 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 GPATCH1Q9BRR8 931 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 RDH8Q9NYR8 311 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 RBAKQ9NYW8 714 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF223Q9UK11 482 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ABCC4O15439 1325 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAD51DO75771 328 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 NR3C2P08235 984 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR52Z1P0C646 297 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB3AP20336 220 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCNHP51946 323 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 FANCCQ00597 558 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAAP100Q0VG06 881 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM98CQ17RN3 349 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 USP41Q3LFD5 358 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 RALGPS1Q5JS13 557 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CACHD1Q5VU97 1274 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 DPY19L2Q6NUT2 758 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR5T3Q8NGG3 340 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ASAP3Q8TDY4 903 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MTFMTQ96DP5 389 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 COMMD4Q9H0A8 199 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PAK6Q9NQU5 681 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PSMC3IPQ9P2W1 217 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SUCOQ9UBS9 1254 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARL5AQ9Y689 179 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANO9A1A5B4 782 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 C20orf202A1L168 122 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PAX6P26367 422 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 YWHAQP27348 245 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 GRK4P32298 578 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ITGA8P53708 1063 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CREB5Q02930 508 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF177Q13360 481 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF235Q14590 738 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM47AQ5JRC9 791 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR52K1Q8NGK4 314 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CPT1BQ92523 772 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 P2RX5Q93086 422 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PUS7LQ9H0K6 701 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MARK1Q9P0L2 795 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MRPS7Q9Y2R9 242 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CLDN25C9JDP6 229 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MYL12AP19105 171 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACOT2P49753 483 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 GATMP50440 423 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CACNB3P54284 484 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 NCKAP1LP55160 1127 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 TCTAP57738 103 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 DDX39BQ13838 428 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 OLFML2AQ68BL7 652 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC39A4Q6P5W5 647 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARMC10Q8N2F6 343 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 NLGN1Q8N2Q7 840 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 DNAAF1Q8NEP3 725 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 WDR24Q96S15 920 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ROPN1BQ9BZX4 212 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARMC7Q9H6L4 198 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ROPN1Q9HAT0 212 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SAR1AQ9NR31 198 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CNOT11Q9UKZ1 510 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 AGAP1Q9UPQ3 857 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CNPY2Q9Y2B0 182 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 EIF2AK4Q9P2K8 1649 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ADAM12O43184 909 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SERPINF2P08697 491 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 TBC1D8BQ0IIM8 1120 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MADCAM1Q13477 382 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PUM1Q14671 1186 aaKnown RBP eCLIP6.14□□□□□ -1.432e-6■■□□□ 11.9
CDC42BPA-201ENST00000334218 SLC17A1Q14916 467 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 TCEA2Q15560 299 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PROSER3Q2NL68 480 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR7G1Q8NGA0 311 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 NPLOC4Q8TAT6 608 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 WRAP53Q9BUR4 548 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 DACT1Q9NYF0 836 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRDM4Q9UKN5 801 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 KRBOX1C9JBD0 128 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 K7ERU9 68 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CRHP06850 196 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GSTT2BP0CG30 244 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 NR4A2P43354 598 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CBX5P45973 191 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GNAQP50148 359 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RPL14P50914 215 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB8AP61006 207 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTGES3Q15185 160 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MLIPQ5VWP3 458 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ATG16L2Q8NAA4 619 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 TNFAIP8L1Q8WVP5 186 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms