RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 PLXNA1Q9UIW2 1896 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 DNAJA2O60884 412 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 NUMBP49757 651 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 MPP1Q00013 466 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 ZNF423Q2M1K9 1284 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 SV2CQ496J9 727 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNIP1-201ENST00000315050 PIGGQ5H8A4 983 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 IYDQ6PHW0 289 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 ZYG11AQ6WRX3 759 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 GPRIN1Q7Z2K8 1008 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 KDELC2Q7Z4H8 507 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 SPATA24Q86W54 205 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 ZC3HC1Q86WB0 502 aaKnown RBP12.88□□□□□ -0.35
TNIP1-201ENST00000315050 TMEM151AQ8N4L1 468 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 FTHL17Q9BXU8 183 aa12.88□□□□□ -0.35
TNIP1-201ENST00000315050 PRPF19Q9UMS4 504 aaKnown RBP12.88□□□□□ -0.35
TNIP1-201ENST00000315050 PEX1O43933 1283 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 MT-CYBP00156 380 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 AHSGP02765 367 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 MMP3P08254 477 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 SLC35E2BP0CK96 405 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 SMPD1P17405 629 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 GABRB3P28472 473 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 CSE1LP55060 971 aaKnown RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 PRKAA1Q13131 559 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 DYNC1I2Q13409 638 aaKnown RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 KIAA0319Q5VV43 1072 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 PAOXQ6QHF9 649 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 BNIPLQ7Z465 357 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 PTAR1Q7Z6K3 402 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 LILRA2Q8N149 483 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 PIP4K2CQ8TBX8 421 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 DNAJB3Q8WWF6 145 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 GPR22Q99680 433 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 SUDS3Q9H7L9 328 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 MID2Q9UJV3 735 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 AP4B1Q9Y6B7 739 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 COMMD3-BMI1R4GMX3 469 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 DLX3O60479 287 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 H2AFYO75367 372 aaKnown RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 DDHD2O94830 711 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 VAPBO95292 243 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 CRTAMO95727 393 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 SRGAP2BP0DMP2 458 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 DARSP14868 501 aaKnown RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 ARSAP15289 507 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.352e-8■■□□□ 13.1
TNIP1-201ENST00000315050 CDH17Q12864 832 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 ZNF792Q3KQV3 632 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 C6orf52Q5T4I8 152 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 ITPRIPL1Q6GPH6 555 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 FAM43BQ6ZT52 329 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 CENPLQ8N0S6 344 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 ARRDC4Q8NCT1 418 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 ZSCAN18Q8TBC5 510 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-201ENST00000315050 NCSTNQ92542 709 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 NXNL1Q96CM4 212 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 CNDP1Q96KN2 507 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 ZFP42Q96MM3 310 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 PRDM16Q9HAZ2 1276 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 OR12D3Q9UGF7 316 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 NRCAMQ92823 1304 aa12.87□□□□□ -0.35
TNIP1-201ENST00000315050 CABYRO75952 493 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 SNAI1O95863 264 aaPredicted RBP12.86□□□□□ -0.35
TNIP1-201ENST00000315050 CLPTM1O96005 669 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 SMIM18P0DKX4 95 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 CYP2C9P11712 490 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 PNPLA4P41247 253 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 NPY2RP49146 381 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 ADGRE1Q14246 886 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 SLC5A9Q2M3M2 681 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 CEP97Q8IW35 865 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 LSMEM2Q8N112 164 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 HAPLN3Q96S86 360 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 PKP2Q99959 881 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 TKTL2Q9H0I9 626 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 RHOJQ9H4E5 214 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 LZTS1Q9Y250 596 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 COPG1Q9Y678 874 aaKnown RBP12.86□□□□□ -0.35
TNIP1-201ENST00000315050 MAGEB16A2A368 324 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 NEMP2A6NFY4 417 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 DFFAO00273 331 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 LRIG2O94898 1065 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 APOA4P06727 396 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 HNRNPLP14866 589 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNIP1-201ENST00000315050 ME2P23368 584 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 RPS6KA3P51812 740 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 SEMA3BQ13214 749 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 SLC12A1Q13621 1099 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 DGKDQ16760 1214 aa12.86□□□□□ -0.35
TNIP1-201ENST00000315050 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms