RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 GSDMBQ8TAX9 411 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 SHKBP1Q8TBC3 707 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 SH3RF2Q8TEC5 729 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 SMG7Q92540 1137 aaKnown RBP11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 SLC22A12Q96S37 553 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 TBL1YQ9BQ87 522 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 SLC46A2Q9BY10 475 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 IL22Q9GZX6 179 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 ACSS3Q9H6R3 686 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 NOL6Q9H6R4 1146 aaKnown RBP11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 TDP1Q9NUW8 608 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 HCFC1R1Q9NWW0 138 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 SENP1Q9P0U3 644 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 TBC1D30Q9Y2I9 924 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 HCFC2Q9Y5Z7 792 aa11.59□□□□□ -0.55
CTDSPL-202ENST00000310189 MYO18AQ92614 2054 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 IQANK1A0A1B0GTG1 560 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 J3KR12 359 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 CBX4O00257 560 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 BANF1O75531 89 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 HLA-DQB2P05538 268 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 GJA1P17302 382 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 KRT15P19012 456 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 HPDP32754 393 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 CD68P34810 354 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 MAGEA3P43357 314 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 NRIP1P48552 1158 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 IRAK1P51617 712 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 MAGOHP61326 146 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 LAMB3Q13751 1172 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 RASA2Q15283 850 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 TEAD2Q15562 447 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 DUSP6Q16828 381 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 SPANXN3Q5MJ09 141 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 OTOP3Q7RTS5 596 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 GRASPQ7Z6J2 395 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 METTL3Q86U44 580 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 MFN1Q8IWA4 741 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 CTAGE3PQ8IX95 158 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 TEX26Q8N6G2 289 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 CNTD1Q8N815 330 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 PPHLN1Q8NEY8 458 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 IPMKQ8NFU5 416 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 OR52K1Q8NGK4 314 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 IFT43Q96FT9 208 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 SIGLEC10Q96LC7 697 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 PRICKLE1Q96MT3 831 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 XPO6Q96QU8 1125 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 TTYH1Q9H313 450 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 NSUN3Q9H649 340 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 SFXN1Q9H9B4 322 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 KIF9Q9HAQ2 790 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 PPANQ9NQ55 473 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 CASS4Q9NQ75 786 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 KIAA1522Q9P206 1035 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 LGALS13Q9UHV8 139 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 ADAM21Q9UKJ8 722 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 FAM169AQ9Y6X4 670 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.56
CTDSPL-202ENST00000310189 CACNG3O60359 315 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 PMPCBO75439 489 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 SERPINF2P08697 491 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 CA4P22748 312 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 MGAT1P26572 445 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 ACVRL1P37023 503 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 GPX6P59796 221 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 PPP2R2AP63151 447 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 TNK2Q07912 1038 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 MTM1Q13496 603 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 NAB1Q13506 487 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 SLC12A1Q13621 1099 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 SPARCL1Q14515 664 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 TMED2Q15363 201 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 KCTD11Q693B1 232 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 RETSATQ6NUM9 610 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 KDM7AQ6ZMT4 941 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 FAM217AQ8IXS0 508 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 OR7D4Q8NG98 312 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 OTUB2Q96DC9 234 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 LRCH3Q96II8 777 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 FICDQ9BVA6 458 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 C2orf49Q9BVC5 232 aaPredicted RBP11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 TXNDC16Q9P2K2 825 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 ZNF212Q9UDV6 495 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 TBK1Q9UHD2 729 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 RABGEF1Q9UJ41 708 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 VPS28Q9UK41 221 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 OBSL1O75147 1896 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 LAMA3Q16787 3333 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 DENND4CQ5VZ89 1909 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 TCRBV9S1A1TA0A576 114 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 KRT37O76014 449 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 KRT38O76015 456 aa11.57□□□□□ -0.56
CTDSPL-202ENST00000310189 PAMP19021 973 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms