RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 LPCAT1Q8NF37 534 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CARD8Q9Y2G2 431 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 H3BM21 787 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 SERPINE1P05121 402 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 BMP7P18075 431 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 GALK1P51570 392 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 MC1RQ01726 317 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 GJB7Q6PEY0 223 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ZSWIM1Q9BR11 485 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 A8MX80 341 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 H7C4K7 107 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 AXIN1O15169 862 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CBX6O95503 412 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 RHOCP08134 193 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 RGS19P49795 217 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 SEPHS1P49903 392 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 BOLA3Q53S33 107 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 PLET1Q6UQ28 207 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ELMO1Q92556 727 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF471Q9BX82 626 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 SDC2P34741 201 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CAV3P56539 151 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 FMR1Q06787 632 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■□□ 17.6
TRIM56-201ENST00000306085 ZNF470Q6ECI4 717 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 DSELQ8IZU8 1212 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 RASGEF1AQ8N9B8 481 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 RNF31Q96EP0 1072 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 SYT15Q9BQS2 421 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CBWD1Q9BRT8 395 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 FADS2O95864 444 aaKnown RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CD151P48509 253 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 MECP2P51608 486 aaKnown RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 INTS11Q5TA45 600 aaKnown RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 PTCHD4Q6ZW05 846 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 RAB43Q86YS6 212 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 INO80EQ8NBZ0 244 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 STK32AQ8WU08 396 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CEP41Q9BYV8 373 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 FRMD8P1Q9BZ68 369 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 PDK3Q15120 406 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 EML3Q32P44 896 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 TFAP2DQ7Z6R9 452 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 TMEM216Q9P0N5 145 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CCDC88CQ9P219 2028 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 TTKP33981 857 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 PEX5LQ8IYB4 626 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 HDDC3Q8N4P3 179 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 PLEKHA1Q9HB21 404 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 METTL21EPA6NDL7 271 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ALOX5P09917 674 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 PTX3P26022 381 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 TLX1P31314 330 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 SETMARQ53H47 684 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 TCEAL6Q6IPX3 200 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 STRBPQ96SI9 672 aaKnown RBP13.55□□□□□ -0.24
TRIM56-201ENST00000306085 CHIAQ9BZP6 476 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 LMAN2LQ9H0V9 348 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 NMRAL1Q9HBL8 299 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ST3GAL5Q9UNP4 418 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ABCG2Q9UNQ0 655 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 KCNIP3Q9Y2W7 256 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 TCF7P36402 384 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 EXD2Q9NVH0 621 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 RAPGEFL1Q9UHV5 662 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 OR2AT4A6NND4 320 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 AKT2P31751 481 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 OR52K2Q8NGK3 314 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 CPNE1Q99829 537 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 TBC1D13Q9NVG8 400 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 TNFSF13BQ9Y275 285 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 MGAT5Q09328 741 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 TUBA3CQ13748 450 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 IL17REQ8NFR9 667 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 OPTCQ9UBM4 332 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ANGPT4Q9Y264 503 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 HIF3AQ9Y2N7 669 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 JCHAINP01591 159 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ACO1P21399 889 aaKnown RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 CDH4P55283 916 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ACOT1Q86TX2 421 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 AMIGO1Q86WK6 493 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF548Q8NEK5 533 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 TRIM43Q96BQ3 446 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 PRAMEF33A0A0G2JMD5 474 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 MAGEB2O15479 319 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 PRAMEF10O60809 474 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 NR2F1P10589 423 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 CUL2Q13617 745 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 CRY1Q16526 586 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 LDHDQ86WU2 507 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ARL15Q9NXU5 204 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 C15orf38-AP3S2A0A0A6YYH1 394 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms