RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 FAM160B2Q86V87 743 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 PSMA8Q8TAA3 256 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 KBTBD7Q8WVZ9 684 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 CNOT6Q9ULM6 557 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 SNX5Q9Y5X3 404 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 TLL2Q9Y6L7 1015 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 H3BNH8 94 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 CCND2P30279 289 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 ADSLP30566 484 aaPredicted RBP16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 ITKQ08881 620 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 TRIM25Q14258 630 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 PPP1R3AQ16821 1122 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 STYK1Q6J9G0 422 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 ZNF280DQ6N043 979 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 DCDC5Q6ZRR9 648 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 CHSY3Q70JA7 882 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 STK32CQ86UX6 486 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 ADAM23O75077 832 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 TADA2AO75478 443 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 FASP25445 335 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 DPP6P42658 865 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 INPP5AQ14642 412 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 ZNF423Q2M1K9 1284 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 BOLA3Q53S33 107 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 SCIMPQ6UWF3 145 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 ATG14Q6ZNE5 492 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 TAS1R3Q7RTX0 852 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 KCTD17Q8N5Z5 321 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 DLG3Q92796 817 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 FBRSL1Q9HCM7 1045 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 CHRAC1Q9NRG0 131 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 PEX10O60683 326 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 ZBTB7AO95365 584 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 ACAT1P24752 427 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 SNRPFP62306 86 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 RAB39AQ14964 217 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 PAF1Q8N7H5 531 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 DOCK2Q92608 1830 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 CDCA7Q9BWT1 371 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 IGSF9Q9P2J2 1179 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 CSADQ9Y600 493 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 B4GALT5O43286 388 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 PRKCHP24723 683 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 NDST1P52848 882 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 PRKAA1Q13131 559 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 TUBB3Q13509 450 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 EPGNQ6UW88 154 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 SHCBP1Q8NEM2 672 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 SDCCAG3Q96C92 435 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 ATG4CQ96DT6 458 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 DACH2Q96NX9 599 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 MRPL4Q9BYD3 311 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 SMOXQ9NWM0 555 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 FEM1BQ9UK73 627 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 VANGL2Q9ULK5 521 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 FAM159BA6NKW6 160 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 TCEA1P23193 301 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 ARPP19P56211 112 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 PCSK7Q16549 785 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 SLC2A7Q6PXP3 512 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 CCDC103Q8IW40 242 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 ACVR1CQ8NER5 493 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 IPMKQ8NFU5 416 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 VPS39Q96JC1 886 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 HAPLN2Q9GZV7 340 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 POMKQ9H5K3 350 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 TMX2Q9Y320 296 aa16.14■□□□□ 0.17
PRPF40B-201ENST00000261897 KPNA4O00629 521 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 CHRM3P20309 590 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 LAMC2Q13753 1193 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 XKR3Q5GH77 459 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 NANOGP8Q6NSW7 305 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 KCNMB4Q86W47 210 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 C17orf50Q8WW18 174 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 ZFYVE19Q96K21 471 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 C3orf70A6NLC5 250 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 YWHAQP27348 245 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 GSTM4Q03013 218 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 THOC7Q6I9Y2 204 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 RWDD4Q6NW29 188 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 SH2D5Q6ZV89 423 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 NT5DC4Q86YG4 428 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 TMEM192Q8IY95 271 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 CELF6Q96J87 481 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 SIK2Q9H0K1 926 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 SPAG4Q9NPE6 437 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 SLC27A5Q9Y2P5 690 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 RAP2CQ9Y3L5 183 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 ELK4P28324 431 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 CXCR3P49682 368 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 BCAT1P54687 386 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 PRKCQQ04759 706 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 ZNF829Q3KNS6 432 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 CCDC153Q494R4 210 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 ZBED5Q49AG3 693 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 VPS26BQ4G0F5 336 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms