RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 ELMO3Q96BJ8 720 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 COG8Q96MW5 612 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 CACNA2D2Q9NY47 1150 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 A8MUA0 341 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TK2O00142 265 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 DENRO43583 198 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TBC1D4O60343 1298 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TOP3BO95985 862 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TGFB2P61812 414 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 CD83Q01151 205 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 HNRNPDQ14103 355 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 UBE2J2Q8N2K1 259 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 LEMD2Q8NC56 503 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 BRSK1Q8TDC3 778 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 JPH3Q8WXH2 748 aaPredicted RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 RORBQ92753 470 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 DHX35Q9H5Z1 703 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 ACSS2Q9NR19 701 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 CCDC59Q9P031 241 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 COG5Q9UP83 839 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 MROH2AA6NES4 1674 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 PRR23AA6NEV1 266 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 MSH4O15457 936 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 APRTP07741 180 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 ELK3P41970 407 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 CACNB2Q08289 660 aaPredicted RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TRAF3Q13114 568 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 GRB10Q13322 594 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 IL23RQ5VWK5 629 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 ZNF555Q8NEP9 628 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SLC22A8Q8TCC7 542 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 NUAK2Q9H093 628 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 NDFIP2Q9NV92 336 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 ERAP1Q9NZ08 941 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 PCDHGA11Q9Y5H2 935 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 BCL9O00512 1426 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 USP32Q8NFA0 1604 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 FAM155BO75949 473 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SGPL1O95470 568 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 MT-ND1P03886 318 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 ICAM1P05362 532 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 DLDP09622 509 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 DSC3Q14574 896 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 CA9Q16790 459 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SPANXN2Q5MJ10 180 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 LZTR1Q8N653 840 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SNX31Q8N9S9 440 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TBC1D15Q8TC07 691 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 MTERF3Q96E29 417 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 LOC100506127A0A0U1RQW1 187 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 TRIM24O15164 1050 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 TOMM70O94826 608 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 HSMCR30P0CW71 290 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 FASP25445 335 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 PSMA4P25789 261 aaKnown RBP13.15□□□□□ -0.3
TMEM260-201ENST00000261556 DSTNP60981 165 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 NFATC3Q12968 1075 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 FRMD7Q6ZUT3 714 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 ARCQ7LC44 396 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 OR8H3Q8N146 312 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 DLG3Q92796 817 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM260-201ENST00000261556 MAP6Q96JE9 813 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 LENG8Q96PV6 779 aaPredicted RBP13.15□□□□□ -0.3
TMEM260-201ENST00000261556 RAB6BQ9NRW1 208 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 POLR3BQ9NW08 1133 aaPredicted RBP13.15□□□□□ -0.3
TMEM260-201ENST00000261556 NCKIPSDQ9NZQ3 722 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 CDY2AQ9Y6F7 541 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 CDY1Q9Y6F8 540 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 DFFAO00273 331 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 DYRK3O43781 588 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 PGK2P07205 417 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 PSKH1P11801 424 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 GRM2Q14416 872 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 SEC23AQ15436 765 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
TMEM260-201ENST00000261556 GANCQ8TET4 914 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 MAGED4Q96JG8 741 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 ZDHHC7Q9NXF8 308 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM260-201ENST00000261556 PSME2Q9UL46 239 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 VANGL2Q9ULK5 521 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 ISPDA4D126 451 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 HDAC3O15379 428 aa13.15□□□□□ -0.3
TMEM260-201ENST00000261556 NRP2O60462 931 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms