RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 KCNK4Q9NYG8 393 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 TBC1D3BA6NDS4 549 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 NT5C1B-RDH14C9J2C7 533 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 CATP04040 527 aaKnown RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 ERVK-10P10266 1014 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 GPD2P43304 727 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 NDST2P52849 883 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 UNC5AQ6ZN44 842 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 KCTD13Q8WZ19 329 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 MAPRE3Q9UPY8 281 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 BIRC5O15392 142 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 AKAP10O43572 662 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 NQO1P15559 274 aaKnown RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 WNT3AP56704 352 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 CNTN1Q12860 1018 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 SETMARQ53H47 684 aaPredicted RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 SDHAF4Q5VUM1 108 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 CES3Q6UWW8 571 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 ZNF555Q8NEP9 628 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 CEP70Q8NHQ1 597 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 ATL1Q8WXF7 558 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 SKA1Q96BD8 255 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 SLC4A5Q9BY07 1137 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 MAGEH1Q9H213 219 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 SAR1AQ9NR31 198 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 SELENONQ9NZV5 590 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 BTAF1O14981 1849 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 NCF1BA6NI72 391 aaPredicted RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 NCF1CA8MVU1 366 aaPredicted RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 PAPSS1O43252 624 aaPredicted RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 NCF1P14598 390 aaPredicted RBP15.2■□□□□ 0.02
UBE4B-201ENST00000253251 PEX5P50542 639 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 MED21Q13503 144 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 DLK2Q6UY11 383 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 FNIP2Q9P278 1114 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 AP3M1Q9Y2T2 418 aa15.2■□□□□ 0.02
UBE4B-201ENST00000253251 TIAM2Q8IVF5 1701 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ZBTB14O43829 449 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 GCATO75600 419 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ATP5F1P24539 256 aaPredicted RBP15.19■□□□□ 0.02
UBE4B-201ENST00000253251 HALP42357 657 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ATP6V0D1P61421 351 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 HPCAP84074 193 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 SOWAHAQ2M3V2 549 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 IFNEQ86WN2 208 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 EME1Q96AY2 570 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 NAF1Q96HR8 494 aaKnown RBP15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ZDHHC6Q9H6R6 413 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 BLOC1S6Q9UL45 172 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 C16orf96A6NNT2 1141 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 CDH4P55283 916 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ZNF572Q7Z3I7 529 aaPredicted RBP15.19■□□□□ 0.02
UBE4B-201ENST00000253251 COPS7BQ9H9Q2 264 aaPredicted RBP15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ABHD14A-ACY1A0A1B0GW23 586 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 GRM6O15303 877 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ACSL4O60488 711 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 TACR2P21452 398 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 TARSP26639 723 aaKnown RBP15.19■□□□□ 0.02
UBE4B-201ENST00000253251 SLC39A4Q6P5W5 647 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 GPSM1Q86YR5 675 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 PRCCQ92733 491 aaPredicted RBP15.19■□□□□ 0.02
UBE4B-201ENST00000253251 GGA2Q9UJY4 613 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 NAV1Q8NEY1 1877 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 E9PAM4 449 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 TPP1O14773 563 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ATP6AP1LQ52LC2 224 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 TMEM110Q86TL2 294 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 MTDHQ86UE4 582 aaKnown RBP15.19■□□□□ 0.02
UBE4B-201ENST00000253251 PHACTR4Q8IZ21 702 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 TMEM109Q9BVC6 243 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 BBS2Q9BXC9 721 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 ZNF556Q9HAH1 456 aa15.19■□□□□ 0.02
UBE4B-201ENST00000253251 MYBPHLA2RUH7 354 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 MAGEC1O60732 1142 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 CYP1B1Q16678 543 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 SLC40A1Q9NP59 571 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 FBXW11Q9UKB1 542 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 FBXO5Q9UKT4 447 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 TLL2Q9Y6L7 1015 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 PRR23AA6NEV1 266 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 MGAT4DA6NG13 374 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 BTN3A1O00481 513 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 FMO4P31512 558 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 NR6A1Q15406 480 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 ZNF618Q5T7W0 954 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 GRAMD4Q6IC98 578 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 GDF6Q6KF10 455 aaPredicted RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 TAPT1Q6NXT6 567 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 PSRC1Q6PGN9 363 aaPredicted RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 SLC39A8Q9C0K1 460 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 DPEP3Q9H4B8 488 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 ASB8Q9H765 288 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 ARHGEF4Q9NR80 690 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms