RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 G430095P16RikE9Q913 147 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Fgf10O35565 209 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Serpina3cP29621 417 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Usp4P35123 962 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 St14P56677 855 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cdh6P97326 790 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 G2e3Q5RJY2 716 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Stard3Q61542 446 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Birc2Q62210 612 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Fam185aQ7TPD2 378 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Znf750Q8BH05 703 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ubr7Q8BU04 425 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Pcyox1lQ8C7K6 495 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ptcd2Q8R3K3 381 aaKnown RBP10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Dhcr24Q8VCH6 516 aaKnown RBP10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Prb1Q91X93 504 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Trem2Q99NH8 227 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Tdrd12Q9CWU0 1215 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Rpl4Q9D8E6 419 aaKnown RBP10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Trip4Q9QXN3 581 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 HephQ9Z0Z4 1157 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cilp2D3Z7H8 1162 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Tmem164Q6PHN7 296 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 H2-M10.2Q85ZW9 329 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Thop1Q8C1A5 687 aaKnown RBP10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Adgrf1Q8VEC3 908 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Stk33Q924X7 491 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ophn1Q99J31 802 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 CatsperzQ9CQP8 194 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Mtif3Q9CZD5 276 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Efhc2Q9D485 750 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cyb561d2Q9WUE3 222 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Znf318Q99PP2 2237 aa10.11□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Skint8A7XV07 398 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gm8257E9Q8R3 264 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ccdc149F6V035 524 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 St3gal1P54751 337 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Mc1rQ01727 315 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Atg16l2Q6KAU8 623 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Lrrc27Q80YS5 523 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Slc6a17Q8BJI1 727 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Olfr478Q8VG04 314 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Olfr1019Q8VGS3 310 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 LrmdaQ9D9B4 229 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 RhoaQ9QUI0 193 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Fut8Q9WTS2 575 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Col12a1Q60847 3120 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gm10718D3Z1I7 227 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Slc7a2P18581 657 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 H2afxP27661 143 aaKnown RBP10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Zbtb14Q08376 449 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cd300lgQ1ERP8 331 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Trim71Q1PSW8 855 aaKnown RBP10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Rnf215Q5SPX3 379 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Znf148Q61624 794 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Dclk2Q6PGN3 756 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Kctd13Q8BGV7 329 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Znf76Q8BMU0 568 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 TfQ921I1 697 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gtf2ird2Q99NI3 936 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Tex46Q9CPU3 165 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Lsm7Q9CQQ8 103 aaKnown RBP10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Isl2Q9CXV0 359 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Vps33aQ9D2N9 598 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Pus10Q9D3U0 527 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 S100pbpQ9D5K4 396 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gm29133A0A1B0GT72 266 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gm597E9Q8J5 896 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ifi206G3UZV2 921 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Arl4cP61208 192 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Pdss1Q33DR2 409 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Adad1Q5SUE7 619 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Serpinb6Q60854 378 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cdc14bQ6PFY9 485 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Proser2Q8C5R2 471 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Slco3a1Q8R3L5 710 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Lrrc3bQ8VCH9 259 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 AdprmQ99KS6 340 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Arl2Q9D0J4 184 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 DtnaQ9D2N4 746 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Nphs1Q9QZS7 1256 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Bscl2Q9Z2E9 383 aa10.1□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Baz2aQ91YE5 1889 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Myo18aQ9JMH9 2050 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 FaahO08914 579 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 DxoO70348 397 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Stx7O70439 261 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Syn1O88935 706 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cd19P25918 547 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 DesP31001 469 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 SmoP56726 793 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 CcnhQ61458 323 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 PrkciQ62074 595 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Casc4Q6P2L7 435 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Wnk4Q80UE6 1222 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ppp4r4Q8C0Y0 875 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 TdrpQ8C5P7 182 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Nup85Q8R480 656 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Mlc1Q8VHK5 382 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms