RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Ring1O35730 406 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Fpr-rs3O88537 343 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Hsdl2Q2TPA8 490 aaKnown RBP23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Arhgap45Q3TBD2 1116 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Prickle1Q3U5C7 832 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Trmt10cQ3UFY8 414 aaKnown RBP23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Kpna1Q60960 538 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Sh3rf1Q69ZI1 892 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Naaladl1Q7M758 745 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Arhgap18Q8K0Q5 663 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Tspan33Q8R3S2 283 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Fads1Q920L1 447 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Agpat3Q9D517 376 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Stau1Q9Z108 487 aaKnown RBP23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Gbf1Q6DFZ1 1861 aa23.4■■□□□ 1.34
Cln6-201ENSMUST00000034776 Gm6588E9Q3K0 461 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Gm3642K7N6V4 267 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 MycP01108 439 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 PdgfrbP05622 1098 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Lmf1Q3U3R4 574 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Sort1Q6PHU5 825 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Hdac7Q8C2B3 938 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Ifi205aQ8CGE8 404 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Tbc1d20Q9D9I4 402 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Slc2a5Q9WV38 501 aa23.39■■□□□ 1.34
Cln6-201ENSMUST00000034776 Vmn2r86G5E8Y4 848 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 P01631 113 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Il12bP43432 335 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 PolgP54099 1218 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 GemP55041 295 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Cdh6P97326 790 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Cntn3Q07409 1028 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Prmt9Q3U3W5 846 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Nfe2l2Q60795 597 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Abcd2Q61285 741 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Orai3Q6P8G8 290 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Cdc14bQ6PFY9 485 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 BoraQ8BS90 525 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Ano4Q8C5H1 955 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Q8CDN1 933 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 NcaldQ91X97 193 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Actrt2Q9D9L5 377 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 MkksQ9JI70 570 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Scube2Q9JJS0 997 aa23.39■■□□□ 1.33
Cln6-201ENSMUST00000034776 Akap5D3YVF0 745 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Rgsl1H3BL40 1073 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Limk2O54785 638 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Sept7O55131 436 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 HcrtO55241 130 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 SrgnP13609 152 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Gdf5P43027 495 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 CidecP56198 239 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Nr2c1Q505F1 590 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 PapolaQ61183 739 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Slc16a9Q7TM99 508 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Asz1Q8VD46 475 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Olfr345Q8VGK4 311 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Tcaf2Q921K8 919 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Ovca2Q9D7E3 225 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Igkv17-121A0A0G2JFA8 117 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Serpinb3cA2RSF9 386 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Gm3187M0QWW3 260 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 P01648 108 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 P01673 111 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Caprin2Q05A80 1031 aaKnown RBP23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Paqr6Q6TCG5 343 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Tas2r115Q7M719 310 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Rpp38Q80UU2 280 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Pcid2Q8BFV2 399 aaKnown RBP23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Trerf1Q8BXJ2 1205 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Ppp4r1Q8K2V1 951 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Gtse1Q8R080 741 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Nudcd3Q8R1N4 363 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Ttc39cQ8VE09 580 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Homer3Q99JP6 356 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 NckipsdQ9ESJ4 714 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Trpc4Q9QUQ5 974 aa23.38■■□□□ 1.33
Cln6-201ENSMUST00000034776 Zbtb11G5E8B9 1050 aaKnown RBP23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Axin1O35625 863 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Adcyap1r1P70205 496 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Klra4Q60651 263 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Ppp1r1bQ60829 194 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Prdm4Q80V63 803 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Zfp398Q8BV16 643 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Trim14Q8BVW3 440 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Glra3Q91XP5 464 aa23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Numa1E9Q7G0 2094 aaKnown RBP23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Obsl1D3YYU8 1804 aaKnown RBP23.37■■□□□ 1.33
Cln6-201ENSMUST00000034776 Zfp626A0A0U1RQ84 676 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Dhx35A2ACQ1 703 aaKnown RBP23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Btg4O70552 250 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Got2P05202 430 aaKnown RBP23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Irf7P70434 457 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Meaf6Q2VPQ9 191 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 1810049J17RikQ3V2G9 153 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Lrrc8bQ5DU41 803 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Olfr464Q5SW48 313 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Tmcc1Q69ZZ6 649 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Podnl1Q6P3Y9 559 aa23.36■■□□□ 1.33
Cln6-201ENSMUST00000034776 Tdpoz3Q717B4 365 aa23.36■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms