RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Bmp3Q8BHE5 468 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Zdhhc14Q8BQQ1 489 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Slc39a13Q8BZH0 361 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 MslnlQ8C160 685 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Q8CC96 669 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Gtf2a1lQ8R4I4 468 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Angel1Q8VCU0 667 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Pin4Q9CWW6 131 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Hipk3Q9ERH7 1192 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Nup50Q9JIH2 466 aaKnown RBP10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Cnga3Q9JJZ8 631 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Myh3P13541 1940 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Zfp472B0V2W5 534 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Zcchc7B1AX39 541 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Nudt18Q3U2V3 323 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Gm8773Q3UQ24 132 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Ankrd42Q3V096 527 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Snx16Q8C080 344 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Calhm4Q8CE93 315 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 DolkQ8R2Y3 534 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Rwdd4Q9CPR1 188 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 HemgnQ9ERZ0 503 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Tnfsf13bQ9WU72 309 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Coro1cQ9WUM4 474 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Lrrc10bG3XA50 292 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Clk2O35491 499 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Ctnnd2O35927 1247 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Pknox1O70477 436 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Btg4O70552 250 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 LipeP54310 759 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Srebf2Q3U1N2 1130 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Gm4951Q3UED7 406 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Plcl1Q3USB7 1096 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Tmem65Q4VAE3 234 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Phactr4Q501J7 694 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Fbxw2Q60584 422 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Ccdc85bQ6PDY0 202 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Olfr412Q7TRW7 312 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Mrpl9Q99N94 265 aaKnown RBP10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Bbs2Q9CWF6 721 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Katnbl1Q9CWJ3 299 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Atp6ap2Q9CYN9 350 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Slc13a2Q9ES88 586 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Scube2Q9JJS0 997 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Ptk2bQ9QVP9 1009 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Deaf1Q9Z1T5 566 aa10.06□□□□□ -0.8
Ldlr-201ENSMUST00000034713 1700031M16RikA0A087WSH0 82 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Kctd14A0A0U1RNG7 287 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Gm4985A2ALC6 410 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 4931406B18RikA2RSL7 367 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Olfr220E9Q050 325 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Ttc7bE9Q6P5 843 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Gm17093F6XGJ4 214 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Slc16a8O35308 492 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Il12bP43432 335 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Sat1P48026 171 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Arf4P61750 180 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Trpc5osQ3UHV4 110 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Magee2Q52KG3 523 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 MelkQ61846 643 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Szrd1Q6NXN1 152 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Fam167aQ6P1G6 215 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Pcid2Q8BFV2 399 aaKnown RBP10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Pex26Q8BGI5 305 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Mrps35Q8BJZ4 320 aaKnown RBP10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Slc22a19Q8VCA0 551 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Ttc39cQ8VE09 580 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Smg8Q8VE18 991 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Snx15Q91WE1 337 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Zfp64Q99KE8 643 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 GarsQ9CZD3 729 aaKnown RBP10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Tomm20lQ9D4V6 152 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Aff4Q9ESC8 1160 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Bscl2Q9Z2E9 383 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Col4a1P02463 1669 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Klhl18A0A0G2JGN5 579 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Cyp4a12bA2A974 508 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 DgkdE9PUQ8 1220 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 JhyE9Q793 770 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Kifc3O35231 824 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Tpst1O70281 370 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Mmp3P28862 477 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Nedd8P29595 81 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Rpl26P61255 145 aaKnown RBP10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Plekha8Q80W71 519 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Rbm22Q8BHS3 420 aaKnown RBP10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Cyp4a12aQ91WL5 508 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Syt12Q920N7 421 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Mzt2Q9CQ25 159 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Gmeb1Q9JL60 562 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Hs6st1Q9QYK5 411 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 4921501E09RikA0A0R4J054 908 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 CtcflA2APF3 636 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Pnldc1B2RXZ1 531 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 AmacrO09174 381 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Gria1P23818 907 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 InaP46660 501 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Cab39Q06138 341 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Inf2Q0GNC1 1273 aa10.05□□□□□ -0.8
Ldlr-201ENSMUST00000034713 Ddx4Q61496 702 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms