RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Tas1r2Q925I4 843 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 PgdQ9DCD0 483 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 MkksQ9JI70 570 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fbxo16Q9QZM9 334 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tubb1A2AQ07 451 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 En1P09065 401 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ap2a2P17427 938 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Itga4Q00651 1039 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Smyd5Q3TYX3 416 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 B3gntl1Q3U129 357 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pdap1Q3UHX2 181 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ppp1r14bQ62084 147 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cypt2Q6P924 180 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Znf821Q6PD05 413 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ssxb3Q6XAS4 170 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rap2cQ8BU31 183 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tp53inp2Q8CFU8 221 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ifi205aQ8CGE8 404 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 TfQ921I1 697 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rwdd4Q9CPR1 188 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Spata31d1aE9QA35 1336 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 CercamA3KGW5 592 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 XntrpcF8VQM8 1264 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Hsd17b7O88736 334 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cct8P42932 548 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ldb1P70662 411 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dab1P97318 588 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Lrfn1Q2WF71 766 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Shcbp1lQ3TTP0 639 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ankrd13bQ5F259 626 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ccdc85bQ6PDY0 202 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gpr141Q7TQP0 305 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Sytl5Q80T23 753 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ireb2Q811J3 963 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fndc3aQ8BX90 1198 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Bag5Q8CI32 447 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Olfr356Q8VFP5 315 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fig4Q91WF7 907 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 MutyhQ99P21 515 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zfp655Q9CZP3 541 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ndc80Q9D0F1 642 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Sned1Q70E20 1403 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 D3Z070 196 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pgk1P09411 417 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Galnt3P70419 633 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Sdr16c6Q05A13 316 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Col9a2Q07643 688 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tnfaip8l3Q3TBL6 204 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dusp16Q6PCP3 660 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 GnasQ6R0H7 1133 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Arhgap28Q8BN58 729 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Znf451Q8C0P7 1056 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tp53bp2Q8CG79 1128 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pcdhb18Q91Y02 792 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ssu72Q9CY97 194 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Noxred1Q9D3S5 366 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vps35Q9EQH3 796 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Map3k20Q9ESL4 802 aaKnown RBP12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Myh11O08638 1972 aa12.92□□□□□ -0.34
Clcn3-201ENSMUST00000004430 SmoktcrA2KF29 484 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Iqca1lA6H690 825 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm4302E9PX25 294 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Psmb10O35955 273 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Grk4O70291 574 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam83fQ3UKU4 495 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cd37Q61470 281 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dlgap3Q6PFD5 977 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tcaf3Q6QR59 914 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rad9bQ6WBX7 403 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Q810S2 196 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Efr3aQ8BG67 819 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pex26Q8BGI5 305 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dyrk4Q8BI55 632 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Amz1Q8BVF9 502 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Acvr1cQ8K348 493 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Satl1Q9D5N8 744 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Actrt2Q9D9L5 377 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rab27aQ9ERI2 221 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Klf1P46099 358 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 B3gat3P58158 335 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 AcadsQ07417 412 aaKnown RBP12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ntrk1Q3UFB7 799 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mrm3Q5ND52 418 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tnfaip2Q61333 691 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rps27lQ6ZWY3 84 aaKnown RBP12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Samd4bQ80XS6 687 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Bri3bpQ8BXV2 253 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Trpm5Q9JJH7 1158 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Piwil1Q9JMB7 862 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Grm3Q9QYS2 879 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zscan4eA0A1B0GRE8 505 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Supt3B0QZW4 406 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn2r103E9PWW0 856 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn1r39G3UWE6 305 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 JchainP01592 159 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Atp5jP97450 108 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Inf2Q0GNC1 1273 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rab26Q504M8 260 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Thrap3Q569Z6 951 aaKnown RBP12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 PhgdhQ61753 533 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms