RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Trim14Q8BVW3 440 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 4932411N23RikQ8C0S0 470 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 NcaphQ8C156 731 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Tas1r3Q925D8 858 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Isl2Q9CXV0 359 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ifi30Q9ESY9 248 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Cdh13Q9WTR5 714 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Slfn2Q9Z0I6 378 aa9.61□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Nup188Q6ZQH8 1759 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Sbno2Q7TNB8 1349 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ssxb8B1AY40 170 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Kng1O08677 661 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ldb1P70662 411 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Gabpb1Q00420 383 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 KizQ3UXL4 695 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Entpd3Q8BFW6 529 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 OsgepQ8BWU5 335 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Rell1Q8K2J7 272 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 ClyblQ8R4N0 338 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Olfr532Q8VGT4 309 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Pip4k2cQ91XU3 421 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Trim8Q99PJ2 551 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ifrd2Q9D8U0 441 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 MajinQ9D992 256 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Aqp5Q9WTY4 265 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 A0A1Y7VP24 259 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Zfp985A2A7A5 519 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Slc16a6B1AT66 607 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 A930018M24RikB7ZMY3 218 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Erich1E9PY43 332 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Tpst1O70281 370 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Cd86P42082 309 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Inf2Q0GNC1 1273 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Coq10bQ3THF9 240 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 9930111J21Rik1Q5SVP0 844 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 SowahcQ8C0J6 512 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Myoz3Q8R4E4 245 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Vps11Q91W86 941 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Tmco1Q921L3 188 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Lyrm1Q9CQB7 122 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Pbld2Q9CXN7 288 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Lsm12Q9D0R8 195 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Efhc1Q9D9T8 648 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ampd2Q9DBT5 798 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Rnft1Q9DCN7 395 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 PollQ9QXE2 573 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Dcun1d1Q9QZ73 259 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 H2afyQ9QZQ8 372 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Gm5751A2AHC8 147 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 SelenovD3YXG1 328 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Mup13L7N222 235 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ptpn9O35239 593 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Trdmt1O55055 415 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 PtprcP06800 1291 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Cyp2a4P15392 494 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Cyp2a5P20852 494 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 PpargP37238 505 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Pfdn6Q03958 127 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ptchd3Q0EEE2 906 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Wdr36Q3TAQ9 899 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Abhd15Q5F2F2 459 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Grm6Q5NCH9 871 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Casc4Q6P2L7 435 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ddx55Q6ZPL9 600 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Mis18bp1Q80WQ8 998 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Zfp418Q8BFS8 652 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 FsbpQ8BKE5 299 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Clptm1lQ8BXA5 539 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Vps50Q8CI71 964 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Exd2Q8VEG4 650 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Reep3Q99KK1 254 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 PigxQ99LV7 254 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Mrps17Q9CQE3 120 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Q9D1Z2 194 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 LrgukQ9D5S7 820 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ddx21Q9JIK5 851 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Ppp2r3cQ9JK24 453 aa9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 VarsQ9Z1Q9 1263 aaKnown RBP9.6□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Cyp4a12bA2A974 508 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Zfp788E9Q980 884 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Atp5bP56480 529 aaKnown RBP9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Psme3P61290 254 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Olfr698Q7TRN4 311 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Olfr297Q7TS07 310 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Thoc5Q8BKT7 683 aaKnown RBP9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Tmtc3Q8BRH0 920 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Rdh13Q8CEE7 334 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Panx3Q8CEG0 392 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Slc35c2Q8VCX2 364 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Rprd1aQ8VDS4 312 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Cyp4a12aQ91WL5 508 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 CrebzfQ91ZR3 358 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Rnf31Q924T7 1066 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 CinpQ9D0V8 212 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Syde1Q9DBZ9 737 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Pidd1Q9ERV7 915 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Top3bQ9Z321 862 aaKnown RBP9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Golga4Q91VW5 2238 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 L3mbtl1A2A5N8 826 aa9.59□□□□□ -0.87
Col6a1-201ENSMUST00000001147 Pex10B1AUE5 324 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms