RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SLC25A13Q9UJS0 675 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 FBXL21Q9UKT6 434 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 DNPEPQ9ULA0 475 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 CA14Q9ULX7 337 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 PLA2G4CQ9UP65 541 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 ERVW-1Q9UQF0 538 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 MRPS17Q9Y2R5 130 aaKnown RBP12.57□□□□□ -0.4
LINC00339-213ENST00000642137 SHROOM3Q8TF72 1996 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 XIRP2A4UGR9 3374 aa12.57□□□□□ -0.4
LINC00339-213ENST00000642137 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 NPC1O15118 1278 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 PEX11BO96011 259 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 ITGAVP06756 1048 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 HNRNPLP14866 589 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00339-213ENST00000642137 GLDCP23378 1020 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 RBL1P28749 1068 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 CHRNA3P32297 505 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 NNMTP40261 264 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 RENBPP51606 427 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 LMNB2Q03252 620 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 FBXO43Q4G163 708 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 FSTL4Q6MZW2 842 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 CDKL3Q8IVW4 592 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-213ENST00000642137 TEX26Q8N6G2 289 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 SPATA4Q8NEY3 305 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 HTR3CQ8WXA8 447 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 MAML1Q92585 1016 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-213ENST00000642137 QKIQ96PU8 341 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00339-213ENST00000642137 UHRF1Q96T88 793 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-213ENST00000642137 VAT1Q99536 393 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 FAM118BQ9BPY3 351 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 CIPCQ9C0C6 399 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 USP29Q9HBJ7 922 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 THAP10Q9P2Z0 257 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-213ENST00000642137 UBA2Q9UBT2 640 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-213ENST00000642137 AMACRQ9UHK6 382 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 ZNF148Q9UQR1 794 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 HS3ST2Q9Y278 367 aa12.56□□□□□ -0.4
LINC00339-213ENST00000642137 EYSQ5T1H1 3165 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 KANSL1LA0AUZ9 987 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 KRBA1A5PL33 1030 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 PHF2O75151 1096 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 MT-CO1P00395 513 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 EGFP01133 1207 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 CCNB1P14635 433 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 COILP38432 576 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 CTSOP43234 321 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 FNTAP49354 379 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 CLCN6P51797 869 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 IFI35P80217 286 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 MRPS21P82921 87 aaKnown RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 SNX1Q13596 522 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 CYTH1Q15438 398 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 PTPRNQ16849 979 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 TEX44Q53QW1 395 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 DGKKQ5KSL6 1271 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 MARC1Q5VT66 337 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 HEATR6Q6AI08 1181 aaKnown RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 BBS5Q8N3I7 341 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 SYNPOQ8N3V7 929 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 SH2D3CQ8N5H7 860 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 CEP112Q8N8E3 955 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 MNS1Q8NEH6 495 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 LRRN4Q8WUT4 740 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 ATG4AQ8WYN0 398 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 EZH1Q92800 747 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 ISG20Q96AZ6 181 aaKnown RBP12.55□□□□□ -0.4
LINC00339-213ENST00000642137 MRGPRX3Q96LB0 322 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 RUNDC3BQ96NL0 473 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 IL12RB2Q99665 862 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 L2HGDHQ9H9P8 463 aa12.55□□□□□ -0.4
LINC00339-213ENST00000642137 MYO18AQ92614 2054 aaKnown RBP12.54□□□□□ -0.4
LINC00339-213ENST00000642137 ATP9BO43861 1147 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 JCHAINP01591 159 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SRCP12931 536 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 VAV1P15498 845 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 CD72P21854 359 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 KIR2DL1P43626 348 aaPredicted RBP12.54□□□□□ -0.4
LINC00339-213ENST00000642137 KCNJ1P48048 391 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 NUMBP49757 651 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SERPINH1P50454 418 aaKnown RBP12.54□□□□□ -0.4
LINC00339-213ENST00000642137 ST8SIA6P61647 398 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SIGLEC14Q08ET2 396 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SLC10A7Q0GE19 358 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 ENPP2Q13822 863 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 CCINQ13939 588 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
LINC00339-213ENST00000642137 EMC10Q5UCC4 262 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 LINGO4Q6UY18 593 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SFTPA1Q8IWL2 248 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 ZNF687Q8N1G0 1237 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 ATP11CQ8NB49 1132 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 GRK7Q8WTQ7 553 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 CYB5D2Q8WUJ1 264 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms