RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PRRG3Q9BZD7 231 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 CD93Q9NPY3 652 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ENTPD7Q9NQZ7 604 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 DNAJC16Q9Y2G8 782 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 SIK3Q9Y2K2 1263 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 RAD54BQ9Y620 910 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 SLIT1O75093 1534 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 MROH1Q8NDA8 1641 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 METTL21EPA6NDL7 271 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 POLRMTO00411 1230 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 CST8O60676 142 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 PROCP04070 461 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 COX4I1P13073 169 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 POLR2CP19387 275 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 MAB21L1Q13394 359 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 NCOA4Q13772 614 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 IQSEC1Q6DN90 963 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ERICH5Q6P6B1 374 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 CBWD2Q8IUF1 395 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ADHFE1Q8IWW8 467 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 FAM109AQ8N4B1 249 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ZNF507Q8TCN5 953 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ZC3H10Q96K80 434 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 DHRS9Q9BPW9 319 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 XKR8Q9H6D3 395 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 DNAJC28Q9NX36 388 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 KCNN3Q9UGI6 736 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ANKRD6Q9Y2G4 727 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 GSTK1Q9Y2Q3 226 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 RBMX2Q9Y388 322 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 PCDHB2Q9Y5E7 798 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 PCDHGA11Q9Y5H2 935 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 HUS1O60921 280 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 ITGA10O75578 1167 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 NFIAQ12857 509 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 TSNQ15631 228 aaKnown RBP8.38□□□□□ -1.07
NECAP1-227ENST00000640648 MTX3Q5HYI7 312 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 ARHGAP17Q68EM7 881 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 CATSPER4Q7RTX7 472 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 ZNF410Q86VK4 478 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 CNTD1Q8N815 330 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 RNF149Q8NC42 400 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 ASZ1Q8WWH4 475 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 CHCHD6Q9BRQ6 235 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 IFT22Q9H7X7 185 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 C12orf10Q9HB07 376 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 CAPGP40121 348 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 AP3S2P59780 193 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 HSF2Q03933 536 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 INSCQ1MX18 579 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 GNASQ5JWF2 1037 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
NECAP1-227ENST00000640648 DCDC5Q6ZRR9 648 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 EXD1Q8NHP7 514 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 TCP10LQ8TDR4 215 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 ACTRT2Q8TDY3 377 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 PPP3R2Q96LZ3 170 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 MMP27Q9H306 513 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 MED11Q9P086 117 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 HMGXB4Q9UGU5 601 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 BOLA2-SMG1P6H3BVE0 249 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 NEMP1O14524 444 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 AP1G1O43747 822 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 PRKCBP05771 671 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 GPIP06744 558 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 RBP3P10745 1247 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 HLA-DPA1P20036 260 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 MUTP22033 750 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 GARTP22102 1010 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 AP3M2P53677 418 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 PPP4CP60510 307 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 MPP1Q00013 466 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 BAATQ14032 418 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-227ENST00000640648 PLEKHG6Q3KR16 790 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 CORO6Q6QEF8 472 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 C3orf67Q6ZVT6 689 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 USP43Q70EL4 1123 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 OTOAQ7RTW8 1153 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 NT5DC3Q86UY8 548 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 SP8Q8IXZ3 490 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 RDH11Q8TC12 318 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 TADA1Q96BN2 335 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 RHBDF1Q96CC6 855 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 NXNL1Q96CM4 212 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 RDH12Q96NR8 316 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 POP1Q99575 1024 aaKnown RBP8.38□□□□□ -1.07
NECAP1-227ENST00000640648 PCDHB16Q9NRJ7 776 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 BLOC1S4Q9NUP1 217 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 ACSL5Q9ULC5 683 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 PRG3Q9Y2Y8 225 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-227ENST00000640648 NCANO14594 1321 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 LOC100653049A0A140TA62 436 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 A8MUI8 341 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 I3L521 148 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 KRT34O76011 436 aa8.38□□□□□ -1.07
NECAP1-227ENST00000640648 RPL21P46778 160 aaKnown RBP8.38□□□□□ -1.07
NECAP1-227ENST00000640648 HARS2P49590 506 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms