RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 R3HCC1Q9Y3T6 440 aaKnown RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 HS3ST3A1Q9Y663 406 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ABCA4P78363 2273 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 PTPRJQ12913 1337 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 LOC100653049A0A140TA62 436 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ESYT3A0FGR9 886 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 KRT34O76011 436 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 OAS1P00973 400 aaKnown RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 EPHX1P07099 455 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 PRKCHP24723 683 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 MSX1P28360 303 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 SOX18P35713 384 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 MC2RQ01718 297 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 EXOSC10Q01780 885 aaKnown RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 KCNAB1Q14722 419 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 NR1D2Q14995 579 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 MAP9Q49MG5 647 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 C4orf48Q5BLP8 95 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 PLEKHA7Q6IQ23 1121 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 USP17L6PQ6QN14 398 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 MED25Q71SY5 747 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 C11orf96Q7Z7L8 435 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 PARGQ86W56 976 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 IRF2BP1Q8IU81 584 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CCDC117Q8IWD4 279 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 THEM5Q8N1Q8 247 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 STAG2Q8N3U4 1231 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 BCORP1Q8N888 145 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 PDZD8Q8NEN9 1154 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 LRRC15Q8TF66 581 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 KCTD13Q8WZ19 329 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CCDC74AQ96AQ1 378 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 PIGSQ96S52 555 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 SPON2Q9BUD6 331 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 SPZ1Q9BXG8 430 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CCDC113Q9H0I3 377 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ANLNQ9NQW6 1124 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 SLC39A1Q9NY26 324 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 GPR83Q9NYM4 423 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CNTN3Q9P232 1028 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 LRWD1Q9UFC0 647 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 MAD2L2Q9UI95 211 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 PLEKHA6Q9Y2H5 1048 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CPQQ9Y646 472 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 TMEM229AB2RXF0 380 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 INO80B-WBP1J3KQ70 363 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 WNT9AO14904 365 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 MUSKO15146 869 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CD5LO43866 347 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 TMCC2O75069 709 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ANXA6P08133 673 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 FGF3P11487 239 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 TYRP14679 529 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 BRAFP15056 766 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 DHX9Q08211 1270 aaKnown RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 HDAC1Q13547 482 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 KCNJ12Q14500 433 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ANO4Q32M45 955 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ZC2HC1CQ53FD0 456 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 MEI1Q5TIA1 1274 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF324BQ6AW86 544 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 WWC2Q6AWC2 1192 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 SERPINA13PQ6UXR4 307 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 KYAT3Q6YP21 454 aaKnown RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CHSY3Q70JA7 882 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 HTR3DQ70Z44 454 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 TMTC2Q8N394 836 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ZADH2Q8N4Q0 377 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 TMEM102Q8N9M5 508 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ASB5Q8WWX0 329 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF577Q9BSK1 485 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 CPEB1Q9BZB8 566 aaKnown RBP3.62□□□□□ -1.83
CCDC7-213ENST00000639290 RASSF1Q9NS23 344 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ELOVL2Q9NXB9 296 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ARHGAP20Q9P2F6 1191 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF510Q9Y2H8 683 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 NTNG1Q9Y2I2 539 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 SH3BP1Q9Y3L3 701 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 B3GALT1Q9Y5Z6 326 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 RPS6KL1Q9Y6S9 549 aa3.62□□□□□ -1.83
CCDC7-213ENST00000639290 FER1L5A0AVI2 2057 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 A6NNZ2 444 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 M0QYT0 321 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 ZBTB39O15060 712 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 JRKO75564 520 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 CPNE6O95741 557 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 PENKP01210 267 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-213ENST00000639290 C5AR1P21730 350 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 AKT2P31751 481 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 GNALP38405 381 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 ADPRHP54922 357 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 MFAP3P55082 362 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 DNM1Q05193 864 aaKnown RBP3.61□□□□□ -1.83
CCDC7-213ENST00000639290 C16orf72Q14CZ0 275 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 EDRF1Q3B7T1 1238 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.61□□□□□ -1.83
CCDC7-213ENST00000639290 CDCA2Q69YH5 1023 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-213ENST00000639290 FAM180AQ6UWF9 173 aa3.61□□□□□ -1.83
CCDC7-213ENST00000639290 TRMT1LQ7Z2T5 733 aaKnown RBP3.61□□□□□ -1.83
CCDC7-213ENST00000639290 KDELC2Q7Z4H8 507 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms