RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KCTD4Q8WVF5 259 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 C1QTNF1Q9BXJ1 281 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PRDM16Q9HAZ2 1276 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 ZBTB26Q9HCK0 441 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SNTG2Q9NY99 539 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 BCAP29Q9UHQ4 241 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM233B4DJY2 109 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 FAM72CH0Y354 149 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 EEF2KO00418 725 aaKnown RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 ZBTB24O43167 697 aaPredicted RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 TIMM44O43615 452 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 VAPBO95292 243 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 FAM200BP0CF97 657 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 SCNN1AP37088 669 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 POU5F1BQ06416 359 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 NME3Q13232 169 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 PAFAH1B3Q15102 231 aaKnown RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 NRF1Q16656 503 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 KYAT1Q16773 422 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF618Q5T7W0 954 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 FAM72AQ5TYM5 149 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 FAM72DQ6L9T8 149 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 FAM72BQ86X60 149 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 NT5DC4Q86YG4 428 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 DLG3Q92796 817 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 ATP6V1E2Q96A05 226 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 CASS4Q9NQ75 786 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 MID2Q9UJV3 735 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 GJD2Q9UKL4 321 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 COPG1Q9Y678 874 aaKnown RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 H3BSA7 217 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 DCLK1O15075 740 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 NMBRP28336 390 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 TKTP29401 623 aaKnown RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 SLC5A2P31639 672 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 CD68P34810 354 aaPredicted RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 GRM5P41594 1212 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 CSE1LP55060 971 aaKnown RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 ADIGQ0VDE8 80 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 PRKAA1Q13131 559 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 DPYSQ14117 519 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 MYBPC3Q14896 1274 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 CYTH1Q15438 398 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 USP41Q3LFD5 358 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 IL23RQ5VWK5 629 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF410Q86VK4 478 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 UNC93AQ86WB7 457 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 MCMBPQ9BTE3 642 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 MLPHQ9BV36 600 aaPredicted RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 SLC2A11Q9BYW1 496 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 IL22Q9GZX6 179 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 SEMA6AQ9H2E6 1030 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 EFCAB1Q9HAE3 211 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 SETD4Q9NVD3 440 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 TLK1Q9UKI8 766 aa11.1□□□□□ -0.63
SNIP1-204ENST00000638725 RUVBL2Q9Y230 463 aaKnown RBP11.1□□□□□ -0.63
SNIP1-204ENST00000638725 TCAF2A6NFQ2 919 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 M0QYT0 321 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 NFKBIEO00221 500 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 CABYRO75952 493 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 HSPA13P48723 471 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 RPL34P49207 117 aaKnown RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF460Q14592 562 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 USP10Q14694 798 aaKnown RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ANO4Q32M45 955 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 Q3C1V9 767 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF484Q5JVG2 852 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 NOL9Q5SY16 702 aaKnown RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 GADL1Q6ZQY3 521 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 GK5Q6ZS86 529 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 FSTL5Q8N475 847 aaPredicted RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 UBP1Q9NZI7 540 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ZSWIM8A7E2V4 1837 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 C7orf72A4D263 438 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 SLC22A2O15244 555 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 TADA2AO75478 443 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 CSPG5O95196 566 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 CAPNS1P04632 268 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 LGALS2P05162 132 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 APOA4P06727 396 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 CDK4P11802 303 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ARSAP15289 507 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF26P17031 533 aaPredicted RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 PSMC3P17980 439 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ERCC2P18074 760 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 NELFEP18615 380 aaKnown RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 CYP2B6P20813 491 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ACADSBP45954 432 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 NR1H2P55055 460 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 PTK2BQ14289 1009 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 HERC3Q15034 1050 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 MGAT5BQ3V5L5 792 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 SYPL2Q5VXT5 272 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms