RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 IGSF8Q969P0 613 aa22.46■■□□□ 1.19
PNKP-220ENST00000627232 ZNF419Q96HQ0 510 aaPredicted RBP22.46■■□□□ 1.19
PNKP-220ENST00000627232 APOL2Q9BQE5 337 aa22.46■■□□□ 1.19
PNKP-220ENST00000627232 CCSER2Q9H7U1 834 aa22.46■■□□□ 1.19
PNKP-220ENST00000627232 PCMTD2Q9NV79 361 aa22.46■■□□□ 1.19
PNKP-220ENST00000627232 ZNF212Q9UDV6 495 aa22.46■■□□□ 1.19
PNKP-220ENST00000627232 DNMT3LQ9UJW3 386 aa22.46■■□□□ 1.19
PNKP-220ENST00000627232 CENPFP49454 3210 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 CNTN5O94779 1100 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 PEX11BO96011 259 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 SOD2P04179 222 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 ITGA2BP08514 1039 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 SPRP35270 261 aaPredicted RBP22.45■■□□□ 1.18
PNKP-220ENST00000627232 SCTRP47872 440 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 YBEYP58557 167 aaPredicted RBP22.45■■□□□ 1.18
PNKP-220ENST00000627232 CCDC15Q0P6D6 951 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 C5orf22Q49AR2 442 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 TPGS2Q68CL5 300 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 KIAA1841Q6NSI8 718 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 KYAT3Q6YP21 454 aaKnown RBP22.45■■□□□ 1.18
PNKP-220ENST00000627232 RAB3IL1Q8TBN0 382 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 ISL2Q96A47 359 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 VWCEQ96DN2 955 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 HMCESQ96FZ2 354 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 SLC13A1Q9BZW2 595 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 SLC25A51Q9H1U9 297 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 RXFP1Q9HBX9 757 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 MRM3Q9HC36 420 aaKnown RBP22.45■■□□□ 1.18
PNKP-220ENST00000627232 ABCF3Q9NUQ8 709 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 NSMCE4AQ9NXX6 385 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 MAGED2Q9UNF1 606 aaPredicted RBP22.45■■□□□ 1.18
PNKP-220ENST00000627232 PSAT1Q9Y617 370 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 USH1CQ9Y6N9 552 aa22.45■■□□□ 1.18
PNKP-220ENST00000627232 ABHD14A-ACY1A0A1B0GW23 586 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 CARNS1A5YM72 827 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 BIRC5O15392 142 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 GLRA3O75311 464 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 ABLIM3O94929 683 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 HMBSP08397 361 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 ATP5C1P36542 298 aaKnown RBP22.44■■□□□ 1.18
PNKP-220ENST00000627232 CSE1LP55060 971 aaKnown RBP22.44■■□□□ 1.18
PNKP-220ENST00000627232 SPRED3Q2MJR0 410 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 PARP15Q460N3 678 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 TEDDM1Q5T9Z0 273 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 KLHDC10Q6PID8 442 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 POTEHQ6S545 545 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 TFAP2DQ7Z6R9 452 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 KCNMB4Q86W47 210 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 IPMKQ8NFU5 416 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 TOP1MTQ969P6 601 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 RBBP8Q99708 897 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 FICDQ9BVA6 458 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 HERC2P3Q9BVR0 1158 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 RASSF4Q9H2L5 321 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 TMEM39AQ9NV64 488 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 SLC17A6Q9P2U8 582 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 SLC12A4Q9UP95 1085 aa22.44■■□□□ 1.18
PNKP-220ENST00000627232 MT-CYBP00156 380 aaPredicted RBP22.43■■□□□ 1.18
PNKP-220ENST00000627232 ALDOAP04075 364 aaKnown RBP22.43■■□□□ 1.18
PNKP-220ENST00000627232 TROVE2P10155 538 aaKnown RBP eCLIP22.43■■□□□ 1.18
PNKP-220ENST00000627232 TPH1P17752 444 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 TACR2P21452 398 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 ALDH3A1P30838 453 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 DSG1Q02413 1049 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 INSCQ1MX18 579 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 GALNTL6Q49A17 601 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 PDPK2PQ6A1A2 396 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 NADSYN1Q6IA69 706 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 DENND5AQ6IQ26 1287 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 PKN3Q6P5Z2 889 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 MICALL1Q8N3F8 863 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 TEX26Q8N6G2 289 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 ZNF461Q8TAF7 563 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 NSMCE1Q8WV22 266 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 ATP2A3Q93084 1043 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 ZNF689Q96CS4 500 aaPredicted RBP22.43■■□□□ 1.18
PNKP-220ENST00000627232 MFSD3Q96ES6 412 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 ZNF558Q96NG5 402 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 RPRD1AQ96P16 312 aaPredicted RBP22.43■■□□□ 1.18
PNKP-220ENST00000627232 CLSTN3Q9BQT9 956 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 TSSK1BQ9BXA7 367 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 SP110Q9HB58 689 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 CHRAC1Q9NRG0 131 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 DCDC2Q9UHG0 476 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 CAPN7Q9Y6W3 813 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 MIA3Q5JRA6 1907 aa22.43■■□□□ 1.18
PNKP-220ENST00000627232 TPP1O14773 563 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 DNAJC8O75937 253 aaPredicted RBP22.42■■□□□ 1.18
PNKP-220ENST00000627232 TGDSO95455 350 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 NEFHP12036 1026 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 RPL17P18621 184 aaKnown RBP22.42■■□□□ 1.18
PNKP-220ENST00000627232 MAGEA12P43365 314 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 LIMK2P53671 638 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 PDE1BQ01064 536 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 IL10RBQ08334 325 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 KDELC1Q6UW63 502 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 RANBP10Q6VN20 620 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 SLC39A11Q8N1S5 342 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 PPHLN1Q8NEY8 458 aaKnown RBP22.42■■□□□ 1.18
PNKP-220ENST00000627232 C10orf82Q8WW14 230 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms