RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 C12orf42Q96LP6 360 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 MYOCQ99972 504 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 GSDMCQ9BYG8 508 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 LHX5Q9H2C1 402 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 GJB4Q9NTQ9 266 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 CLEC3AO75596 197 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SGPL1O95470 568 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SLC10A3P09131 477 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 HNRNPA1P09651 372 aaKnown RBP eCLIP11.25□□□□□ -0.61
VPS8-227ENST00000625842 RAP1GAPP47736 663 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 CLNS1AP54105 237 aaKnown RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 ACTR3P61158 418 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 MGAT5Q09328 741 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SNTA1Q13424 505 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 HIC1Q14526 733 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 NFIL3Q16649 462 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 C1orf146Q5VVC0 180 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 C3orf62Q6ZUJ4 267 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 HEPHQ9BQS7 1158 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SLITRK2Q9H156 845 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 OR12D3Q9UGF7 316 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 AGO1Q9UL18 857 aaKnown RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 DNAJC16Q9Y2G8 782 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
VPS8-227ENST00000625842 CDC42BPBQ9Y5S2 1711 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 TLX3O43711 291 aaPredicted RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 CCDC130P13994 396 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 FBXO43Q4G163 708 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 CLEC4FQ8N1N0 589 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 IRGQQ8WZA9 623 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 BRINP2Q9C0B6 783 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 CCDC177Q9NQR7 707 aaPredicted RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 IMP3Q9NV31 184 aaKnown RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 MICAL2O94851 1124 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 NAB1Q13506 487 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 ZNF776Q68DI1 518 aaPredicted RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 SCARA3Q6AZY7 606 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 C17orf64Q86WR6 236 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 FBXO39Q8N4B4 442 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 OTUB2Q96DC9 234 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 PCBD2Q9H0N5 130 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 DDX47Q9H0S4 455 aaKnown RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 NSUN3Q9H649 340 aaKnown RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 SIK3Q9Y2K2 1263 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 SNX8Q9Y5X2 465 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 EIF3HO15372 352 aaKnown RBP eCLIP11.24□□□□□ -0.61
VPS8-227ENST00000625842 MMEP08473 750 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 SPATA31D3P0C874 917 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 PCSK2P16519 638 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 NUP62P37198 522 aaPredicted RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 C1QTNF8P60827 252 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 ZNF852Q6ZMS4 543 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 MACC1Q6ZN28 852 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 SPATA31D4Q6ZUB0 917 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 TREML1Q86YW5 311 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 TAS1R2Q8TE23 839 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 ASZ1Q8WWH4 475 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 EBNA1BP2Q99848 306 aaKnown RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 TBL1YQ9BQ87 522 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 TACO1Q9BSH4 297 aaKnown RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 C1orf232A0A0U1RR37 186 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 PROSCO94903 275 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 CPSF4O95639 269 aaKnown RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 TNFP01375 233 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 ME2P23368 584 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 SELENOVP59797 346 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 MILR1Q7Z6M3 343 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 COLGALT1Q8NBJ5 622 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 AIF1LQ9BQI0 150 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 CDT1Q9H211 546 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 CATSPERZQ9NTU4 200 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 RGS14O43566 566 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 ALAS2P22557 587 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 PLGLB1Q02325 96 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 OC90Q02509 493 aaPredicted RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 NR6A1Q15406 480 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 DNAL1Q4LDG9 190 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 PHF19Q5T6S3 580 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 DEPDC1Q5TB30 811 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 PAOXQ6QHF9 649 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 R3HCC1LQ7Z5L2 792 aaKnown RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 IL22RA1Q8N6P7 574 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 ZNF606Q8WXB4 792 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 CELF6Q96J87 481 aaKnown RBP11.24□□□□□ -0.61
VPS8-227ENST00000625842 ACOX2Q99424 681 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 MYLK2Q9H1R3 596 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 CCDC134Q9H6E4 229 aa11.24□□□□□ -0.61
VPS8-227ENST00000625842 E9PBE3 544 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 APOA1P02647 267 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 CASP1P29466 404 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 VEGFBP49765 207 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 TAF10Q12962 218 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 GRB10Q13322 594 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 CUL3Q13618 768 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PARP15Q460N3 678 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms