RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PSMB4P28070 264 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 HMOX2P30519 316 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 RELAQ04206 551 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 NHSL2Q5HYW2 709 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 TREML2Q5T2D2 321 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 LIPMQ5VYY2 423 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 ZYG11AQ6WRX3 759 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 GK5Q6ZS86 529 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 NIM1KQ8IY84 436 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 CPNE9Q8IYJ1 553 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 HACE1Q8IYU2 909 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 ACVR1CQ8NER5 493 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 SLC35B4Q969S0 331 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 ZNF669Q96BR6 464 aaPredicted RBP14.35□□□□□ -0.11
LDB3-209ENST00000623056 KCTD15Q96SI1 283 aaPredicted RBP14.35□□□□□ -0.11
LDB3-209ENST00000623056 PAIP1Q9H074 479 aaKnown RBP14.35□□□□□ -0.11
LDB3-209ENST00000623056 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 NOL11Q9H8H0 719 aaKnown RBP14.35□□□□□ -0.11
LDB3-209ENST00000623056 GGA3Q9NZ52 723 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 CDC14AQ9UNH5 594 aa14.35□□□□□ -0.11
LDB3-209ENST00000623056 A0A087WXM4 84 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 TRIM64CA6NLI5 447 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 KCNU1A8MYU2 1149 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 MAFO75444 373 aaPredicted RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 SERPINB7O75635 380 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 ZNF189O75820 626 aaPredicted RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 PSMD8P48556 350 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 ACADVLP49748 655 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 NDST1P52848 882 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 PRAMEP78395 509 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 GSTM4Q03013 218 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 OLIG2Q13516 323 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 TGFBIQ15582 683 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 KCTD21Q4G0X4 260 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 PDCD4Q53EL6 469 aaKnown RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 SNRNP48Q6IEG0 339 aaKnown RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 RWDD4Q6NW29 188 aaKnown RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 PMF1Q6P1K2 205 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 NETO2Q8NC67 525 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 STON2Q8WXE9 905 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 LPGAT1Q92604 370 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 BORCS5Q969J3 196 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 TOP1MTQ969P6 601 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 UHRF1Q96T88 793 aaPredicted RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 IL22Q9GZX6 179 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 CYP3A43Q9HB55 503 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 SLC38A7Q9NVC3 462 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 TUBA8Q9NY65 449 aaPredicted RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 UTP6Q9NYH9 597 aaKnown RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 MID2Q9UJV3 735 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 CNOT6Q9ULM6 557 aaKnown RBP14.34□□□□□ -0.11
LDB3-209ENST00000623056 CROCCQ5TZA2 2017 aa14.34□□□□□ -0.11
LDB3-209ENST00000623056 SLCO1B7G3V0H7 640 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 ATE1O95260 518 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 SBK3P0C264 359 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 COL6A2P12110 1019 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 CKMT2P17540 419 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 NAGLUP54802 743 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 SLC6A3Q01959 620 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 LAMTOR4Q0VGL1 99 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 RALGDSQ12967 914 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 GOLGA7BQ2TAP0 167 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 EEF1DP3Q658K8 133 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 FASTKD5Q7L8L6 764 aaKnown RBP14.33□□□□□ -0.11
LDB3-209ENST00000623056 LSMEM2Q8N112 164 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 PCYT2Q99447 389 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 TASP1Q9H6P5 420 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 PTPRHQ9HD43 1115 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 PGAP2Q9UHJ9 254 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 AP4E1Q9UPM8 1137 aa14.33□□□□□ -0.11
LDB3-209ENST00000623056 TCRBV3S1A0A5B6 114 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 HACD1B0YJ81 288 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 B4GALT5O43286 388 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 HSPA1AP0DMV8 641 aaKnown RBP14.33□□□□□ -0.12
LDB3-209ENST00000623056 HSPA1BP0DMV9 641 aaKnown RBP14.33□□□□□ -0.12
LDB3-209ENST00000623056 GABRB3P28472 473 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 SLC7A1P30825 629 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 RAB15P59190 212 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 CXCL9Q07325 125 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 SPIDRQ14159 915 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 ATF7IP2Q5U623 682 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 ZBTB49Q6ZSB9 765 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 LYSMD3Q7Z3D4 306 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 TTC30AQ86WT1 665 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 ZBTB8OSQ8IWT0 167 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 TMEM151AQ8N4L1 468 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 C12orf29Q8N999 325 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.33□□□□□ -0.12
LDB3-209ENST00000623056 TFAP2CQ92754 450 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 P2RY11Q96G91 374 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 RPF1Q9H9Y2 349 aaKnown RBP14.33□□□□□ -0.12
LDB3-209ENST00000623056 MRPL40Q9NQ50 206 aaKnown RBP14.33□□□□□ -0.12
LDB3-209ENST00000623056 NRBP2Q9NSY0 501 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 DOLKQ9UPQ8 538 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms