RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 NPIPB3Q92617 1050 aa5.61□□□□□ -1.51
VPS29-212ENST00000621131 C8orf48Q96LL4 319 aa5.61□□□□□ -1.51
VPS29-212ENST00000621131 KCNK9Q9NPC2 374 aa5.61□□□□□ -1.51
VPS29-212ENST00000621131 UTS2RQ9UKP6 389 aa5.61□□□□□ -1.51
VPS29-212ENST00000621131 CA14Q9ULX7 337 aa5.61□□□□□ -1.51
VPS29-212ENST00000621131 PCDH11XQ9BZA7 1347 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 PCDH11YQ9BZA8 1340 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 J3KTA2 159 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 ZC3H11AO75152 810 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS29-212ENST00000621131 PPP6R2O75170 966 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 SYF2O95926 243 aaKnown RBP5.6□□□□□ -1.51
VPS29-212ENST00000621131 ITGA5P08648 1049 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 HOXB2P14652 356 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 TBXAS1P24557 533 aaPredicted RBP5.6□□□□□ -1.51
VPS29-212ENST00000621131 ODF3L2Q3SX64 289 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 ASPHD1Q5U4P2 390 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 B4GALNT4Q76KP1 1039 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 KRT27Q7Z3Y8 459 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 EXD3Q8N9H8 876 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 FAM47BQ8NA70 645 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 PJA1Q8NG27 643 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 SLC22A17Q8WUG5 538 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 ASB5Q8WWX0 329 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 EME1Q96AY2 570 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 ZNF347Q96SE7 839 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 WDR83Q9BRX9 315 aaKnown RBP5.6□□□□□ -1.51
VPS29-212ENST00000621131 FZD3Q9NPG1 666 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 FBXO28Q9NVF7 368 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 CHPF2Q9P2E5 772 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 CASZ1Q86V15 1759 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 SCN11AQ9UI33 1791 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 NWD2Q9ULI1 1742 aa5.6□□□□□ -1.51
VPS29-212ENST00000621131 COL5A2P05997 1499 aaPredicted RBP5.59□□□□□ -1.51
VPS29-212ENST00000621131 CEMIPQ8WUJ3 1361 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 CACNA1FO60840 1977 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 PNMA6EA0A0J9YXQ4 647 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 RNMTO43148 476 aaKnown RBP5.59□□□□□ -1.51
VPS29-212ENST00000621131 NTSR2O95665 410 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 CHRNB1P11230 501 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 TNFSF4P23510 183 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 EEF1GP26641 437 aaKnown RBP5.59□□□□□ -1.51
VPS29-212ENST00000621131 CSHL1Q14406 222 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 PTGR1Q14914 329 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 ISM2Q6H9L7 571 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 TTC5Q8N0Z6 440 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 TMEM199Q8N511 208 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 OR52N4Q8NGI2 321 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 PRDM16Q9HAZ2 1276 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 UBE2J1Q9Y385 318 aaPredicted RBP5.59□□□□□ -1.51
VPS29-212ENST00000621131 PCDHB7Q9Y5E2 793 aa5.59□□□□□ -1.51
VPS29-212ENST00000621131 PLCH1Q4KWH8 1693 aa5.59□□□□□ -1.52
VPS29-212ENST00000621131 ADAMTS7Q9UKP4 1686 aa5.59□□□□□ -1.52
VPS29-212ENST00000621131 PXDNLA1KZ92 1463 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 SIPA1L3O60292 1781 aaPredicted RBP5.58□□□□□ -1.52
VPS29-212ENST00000621131 ABCC4O15439 1325 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 A6NNC1 897 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 GTPBP1O00178 669 aaKnown RBP5.58□□□□□ -1.52
VPS29-212ENST00000621131 TM4SF4P48230 202 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 PGGT1BP53609 377 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 P2RX3P56373 397 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 SLC37A1P57057 533 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 CBFBQ13951 182 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 KIAA1755Q5JYT7 1200 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 UNC5CLQ8IV45 518 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 TSPYL6Q8N831 410 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 SRFBP1Q8NEF9 429 aaKnown RBP5.58□□□□□ -1.52
VPS29-212ENST00000621131 ZNF566Q969W8 418 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 MCRS1Q96EZ8 462 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 THOC3Q96J01 351 aaKnown RBP5.58□□□□□ -1.52
VPS29-212ENST00000621131 ABHD14AQ9BUJ0 271 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 NECTIN3Q9NQS3 549 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 HELLSQ9NRZ9 838 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 LAMP3Q9UQV4 416 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 CKAP5Q14008 2032 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 MEGF6O75095 1541 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 WNK3Q9BYP7 1800 aa5.58□□□□□ -1.52
VPS29-212ENST00000621131 N4BP2Q86UW6 1770 aaPredicted RBP5.57□□□□□ -1.52
VPS29-212ENST00000621131 LOC105369274A0A096LPK9 316 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 LOC102723532A0A0G2JNH3 316 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 SPTLC2O15270 562 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 HMMRO75330 724 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 CNTN5O94779 1100 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 ARRB2P32121 409 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 PPATQ06203 517 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 GPR162Q16538 588 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 C6orf10Q5SRN2 563 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 SLC39A5Q6ZMH5 540 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 TTC30AQ86WT1 665 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 DDIASQ8IXT1 998 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 OR4N4Q8N0Y3 316 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 PAQR4Q8N4S7 273 aaPredicted RBP5.57□□□□□ -1.52
VPS29-212ENST00000621131 TMEM57Q8N5G2 664 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 IL17REQ8NFR9 667 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 TMEM174Q8WUU8 243 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 RIPOR3Q96MK2 946 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 HTATIP2Q9BUP3 242 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 AAMDCQ9H7C9 122 aa5.57□□□□□ -1.52
VPS29-212ENST00000621131 MRPL44Q9H9J2 332 aaKnown RBP5.57□□□□□ -1.52
VPS29-212ENST00000621131 IL21RQ9HBE5 538 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms