RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 AADATQ8N5Z0 425 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 CAMK1Q14012 370 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 BRSK2Q8IWQ3 736 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 ACTL9Q8TC94 416 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 CXorf40BQ96DE9 158 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 PRMT6Q96LA8 375 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 SENP6Q9GZR1 1112 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF304Q9HCX3 659 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 YBX3P16989 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 FMO4P31512 558 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 TTPAP49638 278 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 PSEN2P49810 448 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 TRAF3Q13114 568 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 PTGES3Q15185 160 aaKnown RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 R3HCC1LQ7Z5L2 792 aaKnown RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 MIEF2Q96C03 454 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 SLC9A7Q96T83 725 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 TKTL2Q9H0I9 626 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 NFASCO94856 1347 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 KPNA4O00629 521 aaPredicted RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 FTH1P02794 183 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 MSLNQ13421 630 aaPredicted RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 DGUOKQ16854 277 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 C2CD6Q53TS8 623 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 EIF3MQ7L2H7 374 aaKnown RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 KCNF1Q9H3M0 494 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 SPATA20Q8TB22 786 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 SLC9A8Q9Y2E8 581 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 CATP04040 527 aaKnown RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 MGAT1P26572 445 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 CYB5D1Q6P9G0 228 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 NIPA1Q7RTP0 329 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 EMC1Q8N766 993 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 RNF145Q96MT1 663 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 CLCC1Q96S66 551 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 POMKQ9H5K3 350 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 CCDC167Q9P0B6 97 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 H3BNH8 94 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 HMGCRP04035 888 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 PTPN4P29074 926 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 GRIN3AQ8TCU5 1115 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 APOPT1Q96IL0 206 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 SLC27A6Q9Y2P4 619 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 GTPBP1O00178 669 aaKnown RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 SNUPNO95149 360 aaKnown RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 SMIM11AP58511 58 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 PTENP60484 403 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 IQSEC1Q6DN90 963 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 OR6Y1Q8NGX8 325 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 TAS1R2Q8TE23 839 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 GPATCH2LQ9NWQ4 482 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 ETS1P14921 441 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 BDNFP23560 247 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 SEC24CP53992 1094 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 SEMA4DQ92854 862 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 TMBIM4Q9HC24 238 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 CRATP43155 626 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 ARHGDIBP52566 201 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 ACSM2AQ08AH3 577 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 ACSM2BQ68CK6 577 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 TPGS1Q6ZTW0 290 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 CACUL1Q86Y37 369 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 MAML3Q96JK9 1138 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 COMMD9Q9P000 198 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 GPSM3Q9Y4H4 160 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF780BQ9Y6R6 833 aa11.32□□□□□ -0.6
CCDC144B-208ENST00000618081 ASTN2O75129 1339 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 MLYCDO95822 493 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 EPORP19235 508 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 RAET1GQ6H3X3 334 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ESRP1Q6NXG1 681 aaKnown RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ZPBP2Q6X784 338 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 SLC2A14Q8TDB8 520 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 RIBC2Q9H4K1 309 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 CLN6Q9NWW5 311 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TIMM13Q9Y5L4 95 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 CYP2C18P33260 490 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 GSSP48637 474 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 GPAT3Q53EU6 434 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 MIIPQ5JXC2 388 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ELMO1Q92556 727 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 RNF208Q9H0X6 261 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ITGA2P17301 1181 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ACADLP28330 430 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ERVK-24P63145 666 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms