RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 PLK4O00444 970 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 CLDN11O75508 207 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 LDOC1O95751 146 aaPredicted RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 C1SP09871 688 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 CDK4P11802 303 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 NOS2P35228 1153 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 RXRGP48443 463 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 POLR2FP61218 127 aaKnown RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 NOMO3P69849 1222 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 CYP4F3Q08477 520 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 NME3Q13232 169 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 ZNF177Q13360 481 aaPredicted RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 OTUD1Q5VV17 481 aaPredicted RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 OR6B2Q6IFH4 312 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 PRPF39Q86UA1 669 aaKnown RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 PDZD3Q86UT5 571 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 IQCHQ86VS3 1027 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 TRIM69Q86WT6 500 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 RNF214Q8ND24 703 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 PGAP3Q96FM1 320 aaPredicted RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 FAM207AQ9NSI2 230 aaPredicted RBP19.45■□□□□ 0.7
CDX1-202ENST00000616154 TMEM51Q9NW97 253 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 PPM1HQ9ULR3 514 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 DMTF1Q9Y222 760 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 TBC1D30Q9Y2I9 924 aa19.45■□□□□ 0.7
CDX1-202ENST00000616154 MYLKQ15746 1914 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 C1QTNF3-AMACRE9PGA6 284 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 MCF2LO15068 1137 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 RTN2O75298 545 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 PAGE1O75459 146 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 CYP1A1P04798 512 aaPredicted RBP19.44■□□□□ 0.7
CDX1-202ENST00000616154 SOX5P35711 763 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 CNTN1Q12860 1018 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 SYCP1Q15431 976 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 DLG2Q15700 870 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 ACCSLQ4AC99 568 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 AGBL4Q5VU57 503 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 ARCQ7LC44 396 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 C14orf80Q86SX3 495 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 XYLT1Q86Y38 959 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 SH2D3CQ8N5H7 860 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 EID2Q8N6I1 236 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 C18orf8Q96DM3 657 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 NPY6RQ99463 290 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 VPS28Q9UK41 221 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 DOCK4Q8N1I0 1966 aa19.44■□□□□ 0.7
CDX1-202ENST00000616154 M0QYT0 321 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 CBX4O00257 560 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 RFPL3O75679 317 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 MMEP08473 750 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 GGCXP38435 758 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 ACADVLP49748 655 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 CDH4P55283 916 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 CDR2Q01850 454 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 OVGP1Q12889 678 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 DNAJC3Q13217 504 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 SFMBT2Q5VUG0 894 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 Q6ZVU0 165 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 BNIPLQ7Z465 357 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 SPATS2Q86XZ4 545 aaKnown RBP19.43■□□□□ 0.7
CDX1-202ENST00000616154 PIP4K2CQ8TBX8 421 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 SYNCQ9H7C4 482 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 HS3ST2Q9Y278 367 aa19.43■□□□□ 0.7
CDX1-202ENST00000616154 LOC400499M0QZD8 3231 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 SMG1Q96Q15 3661 aaKnown RBP19.42■□□□□ 0.7
CDX1-202ENST00000616154 GOLGA6L19H0YKK7 550 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 MAGEC1O60732 1142 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 ATP1A3P13637 1013 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 MAT2AP31153 395 aaKnown RBP19.42■□□□□ 0.7
CDX1-202ENST00000616154 FMO1Q01740 532 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 SETMARQ53H47 684 aaPredicted RBP19.42■□□□□ 0.7
CDX1-202ENST00000616154 BRMS1LQ5PSV4 323 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 TAF3Q5VWG9 929 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 KANSL1Q7Z3B3 1105 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 ERICH1Q86X53 443 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 HNRNPLLQ8WVV9 542 aaKnown RBP19.42■□□□□ 0.7
CDX1-202ENST00000616154 TSC1Q92574 1164 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 PDCL3Q9H2J4 239 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 PREBQ9HCU5 417 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 PIGVQ9NUD9 493 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 ARHGEF38Q9NXL2 777 aa19.42■□□□□ 0.7
CDX1-202ENST00000616154 CNTN5O94779 1100 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 GFPT2O94808 682 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 SRCP12931 536 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 CHRNB2P17787 502 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 HNF1BP35680 557 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 STAT1P42224 750 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 CXCR3P49682 368 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 TPM4P67936 248 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 KRT83P78385 493 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 UBXN1Q04323 297 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 BNIP3Q12983 259 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 POM121L1PQ3SYA9 428 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 TRIM72Q6ZMU5 477 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 MSANTD4Q8NCY6 345 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 SLC20A1Q8WUM9 679 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 PSMB7Q99436 277 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 SIK2Q9H0K1 926 aa19.41■□□□□ 0.7
CDX1-202ENST00000616154 MUC3BQ9H195 1237 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms