RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 PRAMEF11O60813 436 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 ALDH1A2O94788 518 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 APBB3O95704 486 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 SRCP12931 536 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 GLDCP23378 1020 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 NUMBP49757 651 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 TMEM92Q6UXU6 159 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 LINGO4Q6UY18 593 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 RFX6Q8HWS3 928 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 FAM126AQ9BYI3 521 aaPredicted RBP19.56■□□□□ 0.72
DDX39A-204ENST00000586558 CEP44Q9C0F1 390 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 CD248Q9HCU0 757 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 CHD5Q8TDI0 1954 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 hCG_1818297A0A087WSY0 165 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 TTC34A8MYJ7 566 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 K7ESF4 209 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 DDX3YO15523 660 aaKnown RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 KIF5CO60282 957 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 MT-CO1P00395 513 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 HLA-EP13747 358 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 MX2P20592 715 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 MSNP26038 577 aaKnown RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 IL10RBQ08334 325 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 DLG2Q15700 870 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 ZNF528Q3MIS6 628 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 INO80DQ53TQ3 878 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 MEI1Q5TIA1 1274 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 MAML2Q8IZL2 1156 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 ATPAF2Q8N5M1 289 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 PLD5Q8N7P1 536 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 FRS2Q8WU20 508 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 ISG20Q96AZ6 181 aaKnown RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 CCDC114Q96M63 670 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 KCNH6Q9H252 994 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 SP110Q9HB58 689 aa19.55■□□□□ 0.72
DDX39A-204ENST00000586558 TRMT1Q9NXH9 659 aaKnown RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 IPO11Q9UI26 975 aaKnown RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 PACSIN2Q9UNF0 486 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-204ENST00000586558 CCDC163A0A0D9SF12 145 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 TCRBV21S2A2A0A5A6 115 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 TDGF1P13385 188 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 NRLP54845 237 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 CSTF1Q05048 431 aaKnown RBP19.54■□□□□ 0.72
DDX39A-204ENST00000586558 GALNT2Q10471 571 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 ANGPT1Q15389 498 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 RPS6KA1Q15418 735 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 ACCSLQ4AC99 568 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 KIAA1211LQ6NV74 962 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 C22orf39Q6P5X5 142 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 PCDH20Q8N6Y1 951 aaKnown RBP19.54■□□□□ 0.72
DDX39A-204ENST00000586558 ZNF366Q8N895 744 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 ZNF599Q96NL3 588 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 HHIPQ96QV1 700 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 PDFQ9HBH1 243 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 POLR3BQ9NW08 1133 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-204ENST00000586558 DTLQ9NZJ0 730 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 UBA2Q9UBT2 640 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-204ENST00000586558 EBF1Q9UH73 591 aa19.54■□□□□ 0.72
DDX39A-204ENST00000586558 K7ERQ8 282 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 SMAD6O43541 496 aaKnown RBP19.53■□□□□ 0.72
DDX39A-204ENST00000586558 CD160O95971 181 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 C7P10643 843 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 PYGMP11217 842 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 KRT10P13645 584 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 COL9A1P20849 921 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 TGM2P21980 687 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 NR2C2P49116 596 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 GBE1Q04446 702 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 ELAVL3Q14576 367 aaKnown RBP19.53■□□□□ 0.72
DDX39A-204ENST00000586558 RFTN1Q14699 578 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-204ENST00000586558 C9orf64Q5T6V5 341 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 TMCO4Q5TGY1 634 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 BBS12Q6ZW61 710 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 BZW1Q7L1Q6 419 aaKnown RBP19.53■□□□□ 0.72
DDX39A-204ENST00000586558 OR2T3Q8NH03 318 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 TSGA13Q96PP4 275 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 OSBPL8Q9BZF1 889 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 PRSS16Q9NQE7 514 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 KCND1Q9NSA2 647 aa19.53■□□□□ 0.72
DDX39A-204ENST00000586558 J3KR12 359 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 ALOX15BO15296 676 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 MAFKO60675 156 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 CST8O60676 142 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 SIN3BO75182 1162 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 GARSP41250 739 aaKnown RBP19.52■□□□□ 0.72
DDX39A-204ENST00000586558 DYNLT1P63172 113 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 KAZNQ674X7 775 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 ANO7Q6IWH7 933 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 Q6ZVU0 165 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 DSG4Q86SJ6 1040 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 RASSF3Q86WH2 238 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 TP53INP2Q8IXH6 220 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 PLPP6Q8IY26 295 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 PTPRN2Q92932 1015 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 FATE1Q969F0 183 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 BRD8Q9H0E9 1235 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 CARD9Q9H257 536 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 JRKLQ9Y4A0 524 aa19.52■□□□□ 0.72
DDX39A-204ENST00000586558 FARP1Q9Y4F1 1045 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-204ENST00000586558 HEY1Q9Y5J3 304 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms