RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 MARCKSL1P49006 195 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 PEX5P50542 639 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 PAPOLAP51003 745 aaKnown RBP13.38□□□□□ -0.27
DNMT1-205ENST00000585920 CCR3P51677 355 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 TFDP2Q14188 446 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 RPS6KA1Q15418 735 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 PTPRNQ16849 979 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 ACCSLQ4AC99 568 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 RFX6Q8HWS3 928 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 KDM1BQ8NB78 822 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 FAF2Q96CS3 445 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 HMCESQ96FZ2 354 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 MRGPRX3Q96LB0 322 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 HS3ST6Q96QI5 342 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 LRRC19Q9H756 370 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 SUN2Q9UH99 717 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 SLCO3A1Q9UIG8 710 aa13.38□□□□□ -0.27
DNMT1-205ENST00000585920 PACSIN2Q9UNF0 486 aaPredicted RBP13.38□□□□□ -0.27
DNMT1-205ENST00000585920 MUC3AQ02505 3323 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 APOL1O14791 398 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 ZBTB24O43167 697 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-205ENST00000585920 KIF5CO60282 957 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 SYNCRIPO60506 623 aaKnown RBP13.37□□□□□ -0.27
DNMT1-205ENST00000585920 ADAM23O75077 832 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 EPHX1P07099 455 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 KRT10P13645 584 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 HOXB2P14652 356 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 GLDCP23378 1020 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 CDKN2BP42772 138 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 STK19P49842 368 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-205ENST00000585920 DNA2P51530 1060 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 GEMIN4P57678 1058 aaKnown RBP13.37□□□□□ -0.27
DNMT1-205ENST00000585920 COPS2P61201 443 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 SATB1Q01826 763 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 SERINC3Q13530 473 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 STARD3Q14849 445 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 PAFAH1B3Q15102 231 aaKnown RBP13.37□□□□□ -0.27
DNMT1-205ENST00000585920 LLGL1Q15334 1064 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 CRY1Q16526 586 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 TFDP3Q5H9I0 405 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 AFMIDQ63HM1 303 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 KAZNQ674X7 775 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 LINGO4Q6UY18 593 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 C1orf210Q8IVY1 113 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 NPWQ8N729 165 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 PQLC3Q8N755 202 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 ATP11CQ8NB49 1132 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 NETO2Q8NC67 525 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 HES6Q96HZ4 224 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 GABRG3Q99928 467 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 TMEM245Q9H330 911 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 POLMQ9NP87 494 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-205ENST00000585920 POLR3BQ9NW08 1133 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-205ENST00000585920 MFHAS1Q9Y4C4 1052 aa13.37□□□□□ -0.27
DNMT1-205ENST00000585920 CXorf51AA0A1B0GTR3 108 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 ZSCAN5CA6NGD5 496 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-205ENST00000585920 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
DNMT1-205ENST00000585920 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 MT-CO1P00395 513 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 PYGMP11217 842 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 HLA-EP13747 358 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 PRKCHP24723 683 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 MSNP26038 577 aaKnown RBP13.36□□□□□ -0.27
DNMT1-205ENST00000585920 DGKEP52429 567 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 DYNLT1P63172 113 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 ARF5P84085 180 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 ENPP2Q13822 863 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 TAZQ16635 292 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 MEI1Q5TIA1 1274 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 NCBP2-AS2Q69YL0 99 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 ARHGAP12Q8IWW6 846 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 SH2D3CQ8N5H7 860 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 ALG3Q92685 438 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 TRIM44Q96DX7 344 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-205ENST00000585920 HEMGNQ9BXL5 484 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 SP110Q9HB58 689 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 C2orf42Q9NWW7 574 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 HS3ST2Q9Y278 367 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 RAD54BQ9Y620 910 aa13.36□□□□□ -0.27
DNMT1-205ENST00000585920 hCG_1818297A0A087WSY0 165 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 K7ERQ8 282 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 ATP9BO43861 1147 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 CST8O60676 142 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 ALDH1A2O94788 518 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 SRCP12931 536 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 MX2P20592 715 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 CSTF1Q05048 431 aaKnown RBP13.35□□□□□ -0.27
DNMT1-205ENST00000585920 ZNF211Q13398 564 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-205ENST00000585920 DLG2Q15700 870 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 PPP2R5EQ16537 467 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 CCDC181Q5TID7 509 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 LEKR1Q6ZMV7 388 aa13.35□□□□□ -0.27
DNMT1-205ENST00000585920 LRRC49Q8IUZ0 686 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms