RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ZMPSTE24O75844 475 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 STK10O94804 968 aaKnown RBP18.68■□□□□ 0.58
RFFL-211ENST00000584541 SRPRAP08240 638 aaKnown RBP18.68■□□□□ 0.58
RFFL-211ENST00000584541 GLDCP23378 1020 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 ST8SIA6P61647 398 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 ARF5P84085 180 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 RFTN1Q14699 578 aaPredicted RBP18.68■□□□□ 0.58
RFFL-211ENST00000584541 CYP1B1Q16678 543 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 TMCO4Q5TGY1 634 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 TMEM215Q68D42 235 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 CCDC26Q8TAB7 109 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 CASKIN2Q8WXE0 1202 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 CCDC114Q96M63 670 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 RUNDC3BQ96NL0 473 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 NECAB3Q96P71 396 aaPredicted RBP18.68■□□□□ 0.58
RFFL-211ENST00000584541 UHRF1Q96T88 793 aaPredicted RBP18.68■□□□□ 0.58
RFFL-211ENST00000584541 PDFQ9HBH1 243 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 CD320Q9NPF0 282 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 FEZ2Q9UHY8 353 aaPredicted RBP18.68■□□□□ 0.58
RFFL-211ENST00000584541 SLC8A2Q9UPR5 921 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 ERVW-1Q9UQF0 538 aa18.68■□□□□ 0.58
RFFL-211ENST00000584541 DRG1Q9Y295 367 aaKnown RBP18.68■□□□□ 0.58
RFFL-211ENST00000584541 PRRT4C9JH25 899 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 ITGAVP06756 1048 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 DLDP09622 509 aaKnown RBP18.67■□□□□ 0.58
RFFL-211ENST00000584541 RBL1P28749 1068 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 CHRNA3P32297 505 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 RENBPP51606 427 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 MESP2Q0VG99 397 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 IER5LQ5T953 404 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 MARC1Q5VT66 337 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 LINGO4Q6UY18 593 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 ZNF572Q7Z3I7 529 aaPredicted RBP18.67■□□□□ 0.58
RFFL-211ENST00000584541 CEP112Q8N8E3 955 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 ATP11CQ8NB49 1132 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 SPATA4Q8NEY3 305 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 LRRN4Q8WUT4 740 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 HTR3CQ8WXA8 447 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 FBRSL1Q9HCM7 1045 aaKnown RBP18.67■□□□□ 0.58
RFFL-211ENST00000584541 SEPT10Q9P0V9 454 aa18.67■□□□□ 0.58
RFFL-211ENST00000584541 SGK1O00141 431 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 KCNN4O15554 427 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 CCNB1P14635 433 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 STIP1P31948 543 aaKnown RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 COILP38432 576 aaPredicted RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 CTSOP43234 321 aaPredicted RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 FNTAP49354 379 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 SERPINH1P50454 418 aaKnown RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 CLCN6P51797 869 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 HNRNPDQ14103 355 aaKnown RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 LBRQ14739 615 aaKnown RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 OASLQ15646 514 aaKnown RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 FBXO43Q4G163 708 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 INO80DQ53TQ3 878 aaPredicted RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 FSTL4Q6MZW2 842 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 CCDC137Q6PK04 289 aaKnown RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 LEKR1Q6ZMV7 388 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 B4GALNT4Q76KP1 1039 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 GSTA5Q7RTV2 222 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 CCDC105Q8IYK2 499 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 SIX5Q8N196 739 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 ATL2Q8NHH9 583 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 GRK7Q8WTQ7 553 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 CYB5D2Q8WUJ1 264 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 RPL10LQ96L21 214 aaKnown RBP18.66■□□□□ 0.58
RFFL-211ENST00000584541 VAT1Q99536 393 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 TMEM121Q9BTD3 319 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 HS3ST2Q9Y278 367 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 STARD13Q9Y3M8 1113 aa18.66■□□□□ 0.58
RFFL-211ENST00000584541 CTAGE15A4D2H0 777 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 KCNK1O00180 336 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 NPC1O15118 1278 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 EGFP01133 1207 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 CTAGE8P0CG41 777 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 VAV1P15498 845 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 ACTN2P35609 894 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 MMP13P45452 471 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 VASPP50552 380 aaPredicted RBP18.65■□□□□ 0.58
RFFL-211ENST00000584541 STARD6P59095 220 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 IFI35P80217 286 aaPredicted RBP18.65■□□□□ 0.58
RFFL-211ENST00000584541 ZXDAP98168 799 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 ZNF235Q14590 738 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 FNDC3BQ53EP0 1204 aaKnown RBP18.65■□□□□ 0.58
RFFL-211ENST00000584541 CTAGE6Q86UF2 777 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 CTAGE4Q8IX94 777 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 KLHL7Q8IXQ5 586 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 SH2D3CQ8N5H7 860 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 KDM1BQ8NB78 822 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 KCNV2Q8TDN2 545 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 SORCS1Q8WY21 1168 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 MAML1Q92585 1016 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 NELL2Q99435 816 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 CINPQ9BW66 212 aaPredicted RBP18.65■□□□□ 0.58
RFFL-211ENST00000584541 DDX47Q9H0S4 455 aaKnown RBP18.65■□□□□ 0.58
RFFL-211ENST00000584541 C10orf88Q9H8K7 445 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 RBM12Q9NTZ6 932 aaKnown RBP18.65■□□□□ 0.58
RFFL-211ENST00000584541 SEPT3Q9UH03 358 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 NDRG2Q9UN36 371 aaKnown RBP18.65■□□□□ 0.58
RFFL-211ENST00000584541 VCANP13611 3396 aa18.65■□□□□ 0.58
RFFL-211ENST00000584541 MUC22E2RYF6 1773 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms