RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 DKK3Q9UBP4 350 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 RAPGEFL1Q9UHV5 662 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 GAKO14976 1311 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 PLK1P53350 603 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 RAB25P57735 213 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 ISLR2Q6UXK2 745 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 TRABD2AQ86V40 505 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 SYT12Q8IV01 421 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 DENND6AQ8IWF6 608 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 ZNF671Q8TAW3 534 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 SYT15Q9BQS2 421 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 TBCDQ9BTW9 1192 aa13.23□□□□□ -0.29
RNF43-208ENST00000584437 TARBP1Q13395 1621 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 TSPAN9O75954 239 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 LTFP02788 710 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 IDH2P48735 452 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 CWF19L1Q69YN2 538 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 RETSATQ6NUM9 610 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 OTOP1Q7RTM1 612 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 PQLC1Q8N2U9 271 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 NKAPQ8N5F7 415 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 ZNF540Q8NDQ6 660 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 PSMD13Q9UNM6 376 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 UMODL1Q5DID0 1318 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 USP32Q8NFA0 1604 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 TCRBV5S4A2TA0A5A2 114 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 CBX4O00257 560 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 FSCN2O14926 492 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 MBL2P11226 248 aaPredicted RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 RPL22P35268 128 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 CLCN5P51795 746 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 ACSM2AQ08AH3 577 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 ADIGQ0VDE8 80 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 ACSM2BQ68CK6 577 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 MTSS1LQ765P7 747 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 EIF3MQ7L2H7 374 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 SH3GLB1Q9Y371 365 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 PCDHB7Q9Y5E2 793 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 DHRS12A0PJE2 317 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 HAT1O14929 419 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 MLYCDO95822 493 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 FAM86B2P0C5J1 330 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 OR56A5P0C7T3 313 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 IL2P60568 153 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 MAMLD1Q13495 774 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 LRRC49Q8IUZ0 686 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 IZUMO1Q8IYV9 350 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 LRRC17Q8N6Y2 441 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 ACER1Q8TDN7 264 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 MRPS31Q92665 395 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 TMEM159Q96B96 161 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 SERPINB11Q96P15 392 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 RTKNQ9BST9 563 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 PIGUQ9H490 435 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 FBXO44Q9H4M3 255 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 PTPRHQ9HD43 1115 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 TULP2O00295 520 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 ALOX15BO15296 676 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 LRG1P02750 347 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
RNF43-208ENST00000584437 GRIA4P48058 902 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 ALDH9A1P49189 494 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 ZNF549Q6P9A3 640 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 SPESP1Q6UW49 350 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 UCMAQ8WVF2 138 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 RTFDC1Q9BY42 306 aaPredicted RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 PIH1D1Q9NWS0 290 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 R3HDM2Q9Y2K5 976 aaKnown RBP13.22□□□□□ -0.29
RNF43-208ENST00000584437 NRXN1Q9ULB1 1477 aa13.22□□□□□ -0.29
RNF43-208ENST00000584437 DBTP11182 482 aaKnown RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 ITGA2P17301 1181 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 STARD3Q14849 445 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 TAF1CQ15572 869 aaPredicted RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 ATG14Q6ZNE5 492 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 LRRC55Q6ZSA7 311 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 DEFB106AQ8N104 65 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 SYTL5Q8TDW5 730 aaPredicted RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 AP3S1Q92572 193 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 ZDHHC15Q96MV8 337 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 UBE2QL1A1L167 161 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 H3BNX3 289 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 TRAFD1O14545 582 aaPredicted RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 VIL1P09327 827 aaKnown RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 SRP54P61011 504 aaKnown RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 PTSQ03393 145 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 AADACL2Q6P093 401 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 METTL7BQ6UX53 244 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 FAM13CQ8NE31 585 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 AGBL3Q8NEM8 1001 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 KIFC1Q9BW19 673 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 TRIM39Q9HCM9 518 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 TLR8Q9NR97 1041 aaKnown RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 ERGIC3Q9Y282 383 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 SQORQ9Y6N5 450 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms