RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZNF606Q8WXB4 792 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 RNF34Q969K3 372 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 ZNF578Q96N58 590 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-221ENST00000583080 DEPDC7Q96QD5 511 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 MED15Q96RN5 788 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 CPXM1Q96SM3 734 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 PSMB7Q99436 277 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 SEMA4CQ9C0C4 833 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 ZFR2Q9UPR6 939 aaKnown RBP16.57■□□□□ 0.24
SREBF1-221ENST00000583080 COL6A6A6NMZ7 2263 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-221ENST00000583080 MED7O43513 233 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 USP12O75317 370 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 NEBLO76041 1014 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 CNTN5O94779 1100 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 SLC2A3P11169 496 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 HNRNPA2B1P22626 353 aaKnown RBP16.56■□□□□ 0.24
SREBF1-221ENST00000583080 RRM1P23921 792 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 GNA15P30679 374 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 CHRNA3P32297 505 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 ZNF177Q13360 481 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-221ENST00000583080 HS1BP3Q53T59 392 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 ARHGAP40Q5TG30 622 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 OTUD1Q5VV17 481 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-221ENST00000583080 OR6B2Q6IFH4 312 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 KLHL10Q6JEL2 608 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 TRIM59Q8IWR1 403 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 CHST14Q8NCH0 376 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 OR2A12Q8NGT7 310 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 GRIN3AQ8TCU5 1115 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 DHTKD1Q96HY7 919 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-221ENST00000583080 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
SREBF1-221ENST00000583080 MUC3BQ9H195 1237 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 NLGN3Q9NZ94 848 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 VPS51Q9UID3 782 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 MAN1B1Q9UKM7 699 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 HS3ST2Q9Y278 367 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 ATP6V1DQ9Y5K8 247 aa16.56■□□□□ 0.24
SREBF1-221ENST00000583080 SMAD6O43541 496 aaKnown RBP16.55■□□□□ 0.24
SREBF1-221ENST00000583080 PAGE1O75459 146 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 DXOO77932 396 aaKnown RBP16.55■□□□□ 0.24
SREBF1-221ENST00000583080 AKT2P31751 481 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 TMPRSS3P57727 454 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 NME3Q13232 169 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 STIM1Q13586 685 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 ALFQ53S48 1182 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 GJB7Q6PEY0 223 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 FAM183BPQ6ZVS7 135 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 PTAR1Q7Z6K3 402 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-221ENST00000583080 ABI3BPQ7Z7G0 1075 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 PASD1Q8IV76 773 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 WDTC1Q8N5D0 677 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 KCNE4Q8WWG9 221 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.55■□□□□ 0.24
SREBF1-221ENST00000583080 OSBPL2Q9H1P3 480 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 UBE2TQ9NPD8 197 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-221ENST00000583080 ASCL3Q9NQ33 180 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 ANLNQ9NQW6 1124 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 CTNND2Q9UQB3 1225 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 TBC1D30Q9Y2I9 924 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 SNX10Q9Y5X0 201 aa16.55■□□□□ 0.24
SREBF1-221ENST00000583080 A0A1W2PNU3 283 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-221ENST00000583080 BECN2A8MW95 431 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 I6L893 689 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-221ENST00000583080 J3QKU1 62 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 K7ESM1 405 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 HSF2BPO75031 334 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 CLDN11O75508 207 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
SREBF1-221ENST00000583080 BMP6P22004 513 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 LSSP48449 732 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 APBA1Q02410 837 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 FGL2Q14314 439 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 C5orf22Q49AR2 442 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 TMEM259Q4ZIN3 620 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 NEK5Q6P3R8 708 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 LINGO4Q6UY18 593 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 ATP11CQ8NB49 1132 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 VCPIP1Q96JH7 1222 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 TNKS2Q9H2K2 1166 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 POLR1BQ9H9Y6 1135 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 GPR27Q9NS67 375 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 ASNSD1Q9NWL6 643 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 DNAJC28Q9NX36 388 aa16.54■□□□□ 0.24
SREBF1-221ENST00000583080 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 PYCARD-AS1I3L0S3 204 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 KLK10O43240 276 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 DAB1O75553 588 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 PCDH8O95206 1070 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 GP1BAP07359 652 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 RHOCP08134 193 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 GLI1P08151 1106 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 ALPPL2P10696 532 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 TFE3P19532 575 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-221ENST00000583080 CDH4P55283 916 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 RHDQ02161 417 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 LY6DQ14210 128 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 BROXQ5VW32 411 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms