RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HYAL3O43820 417 aaPredicted RBP12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 CHRNB2P17787 502 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 OR1E1P30953 314 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 DRD3P35462 400 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 CCT8P50990 548 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 CCR5P51681 352 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 SUZ12Q15022 739 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 CDO1Q16878 200 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 ARL13BQ3SXY8 428 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 UNQ6494/PRO21346Q6UXR6 183 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 BNIPLQ7Z465 357 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 ORAI3Q9BRQ5 295 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 ZYG11BQ9C0D3 744 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 NAT10Q9H0A0 1025 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 AASDHPPTQ9NRN7 309 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 SEPT11Q9NVA2 429 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 MPP6Q9NZW5 540 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 VPS51Q9UID3 782 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 PCOLCE2Q9UKZ9 415 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 PCDHGB2Q9Y5G2 931 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3EA0A087X179 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3KA0A087X1G2 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 A0A0D9SEW6 157 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3FA6NER0 549 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3LB9A6J9 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 MCF2LO15068 1137 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 VILLO15195 856 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 SLC7A4O43246 635 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 SNAP91O60641 907 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3HP0C7X1 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 FTH1P19P0C7X4 201 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 SRCP12931 536 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 METAP1P53582 386 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TYRO3Q06418 890 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 INAVAQ3KP66 663 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 POM121L1PQ3SYA9 428 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3GQ6DHY5 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3CQ6IPX1 549 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 PHLDB2Q86SQ0 1253 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D3Q8IZP1 549 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 AOPEPQ8N6M6 819 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 PIP4K2CQ8TBX8 421 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 RXFP2Q8WXD0 754 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 ERGIC2Q96RQ1 377 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 PSMB7Q99436 277 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 ADAM22Q9P0K1 906 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 SARDHQ9UL12 918 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 PPM1HQ9ULR3 514 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 APOBEC2Q9Y235 224 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 NEUROG3Q9Y4Z2 214 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 IGF2RP11717 2491 aa12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 KMT2BQ9UMN6 2715 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-205ENST00000570828 NUMA1Q14980 2115 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 ILVBLA1L0T0 632 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 C1QTNF9BB2RNN3 333 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CBX4O00257 560 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PLK4O00444 970 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PLRG1O43660 514 aaKnown RBP12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 DFNA5O60443 496 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CBFA2T3O75081 653 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 RTN2O75298 545 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 ENDOD1O94919 500 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 MT-CO1P00395 513 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CALB1P05937 261 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PROS1P07225 676 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 C1QTNF9P0C862 333 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 KRT3P12035 628 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 UNGP13051 313 aaPredicted RBP12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 RRM1P23921 792 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CTSKP43235 329 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 GRK6P43250 576 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PTPN9P43378 593 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 RECQLP46063 649 aaPredicted RBP12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PPP2CBP62714 309 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PPP2CAP67775 309 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CNTN1Q12860 1018 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 NCAPHQ15003 741 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CLEC16AQ2KHT3 1053 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 C15orf59Q2T9L4 293 aaPredicted RBP12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CCDC14Q49A88 953 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 SLC45A4Q5BKX6 768 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 AGBL4Q5VU57 503 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 RETSATQ6NUM9 610 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 RWDD4Q6NW29 188 aaKnown RBP12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 C22orf39Q6P5X5 142 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 LINGO4Q6UY18 593 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 STRADAQ7RTN6 431 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 DRC7Q8IY82 874 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 OR7D4Q8NG98 312 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 JOSD2Q8TAC2 188 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 RHBDD1Q8TEB9 315 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 FAM131CQ96AQ9 280 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 SERAC1Q96JX3 654 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PCDHB18PQ96TA0 734 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 CDC6Q99741 560 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms