RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 HAUS1Q96CS2 278 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 ALG14Q96F25 216 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 C16orf45Q96MC5 204 aaPredicted RBP11.73□□□□□ -0.53
KARS-207ENST00000566560 NELL2Q99435 816 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 HEMGNQ9BXL5 484 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 OSBPL6Q9BZF3 934 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 SLC39A8Q9C0K1 460 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 SP110Q9HB58 689 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 ELOVL2Q9NXB9 296 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 SLC25A13Q9UJS0 675 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 HPCAL4Q9UM19 191 aa11.73□□□□□ -0.53
KARS-207ENST00000566560 MTF2Q9Y483 593 aaPredicted RBP11.73□□□□□ -0.53
KARS-207ENST00000566560 A0A0A0MRY4 1105 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 TIMM44O43615 452 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 TJP3O95049 919 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 DLDP09622 509 aaKnown RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 KIR2DL1P43626 348 aaPredicted RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 STK19P49842 368 aaPredicted RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 PAPOLAP51003 745 aaKnown RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 ARF5P84085 180 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 ECT2LQ008S8 904 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 GALNT2Q10471 571 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 E2F5Q15329 346 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 FNDC3BQ53EP0 1204 aaKnown RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 C2orf27AQ580R0 203 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 NPNTQ6UXI9 565 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 BBS12Q6ZW61 710 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 TRMT11Q7Z4G4 463 aaKnown RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 TP53INP2Q8IXH6 220 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 CHPFQ8IZ52 775 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 SYNPOQ8N3V7 929 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 CCDC33Q8N5R6 958 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 RPLP0P6Q8NHW5 317 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 TTC17Q96AE7 1141 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 ACDQ96AP0 544 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 NAPGQ99747 312 aaPredicted RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 ACE2Q9BYF1 805 aaPredicted RBP11.72□□□□□ -0.53
KARS-207ENST00000566560 EPHX3Q9H6B9 360 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 LMAN1LQ9HAT1 526 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 ZDHHC4Q9NPG8 344 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 DTLQ9NZJ0 730 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 EFR3BQ9Y2G0 817 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 STARD13Q9Y3M8 1113 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 SIT1Q9Y3P8 196 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 HEY1Q9Y5J3 304 aa11.72□□□□□ -0.53
KARS-207ENST00000566560 CTAGE9A4FU28 777 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ANTXRLA6NF34 631 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ZSCAN5CA6NGD5 496 aaPredicted RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 APOC4-APOC2K7ER74 178 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 NPC1O15118 1278 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ZMPSTE24O75844 475 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 KLF8O95600 359 aaPredicted RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 APOC2P02655 101 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 DCNP07585 359 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 SRPRAP08240 638 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 AOC1P19801 751 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 MX2P20592 715 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 CXCR5P32302 372 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 GARSP41250 739 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 SERPINH1P50454 418 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 GEMIN4P57678 1058 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 ST8SIA6P61647 398 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 MRPS21P82921 87 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 ADCY2Q08462 1091 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 SERINC3Q13530 473 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ZNF234Q14588 700 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 QPCTQ16769 361 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 PTPRNQ16849 979 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 RETSATQ6NUM9 610 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 SERPINA13PQ6UXR4 307 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 LINGO4Q6UY18 593 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ARHGAP36Q6ZRI8 547 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ZSCAN30Q86W11 494 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ALLCQ8N6M5 410 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 USP33Q8TEY7 942 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 P3H4Q92791 437 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 RPL10LQ96L21 214 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 OLFM3Q96PB7 478 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 CHRDQ9H2X0 955 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 CACNA2D2Q9NY47 1150 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 THAP10Q9P2Z0 257 aaPredicted RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 IPO11Q9UI26 975 aaKnown RBP11.71□□□□□ -0.53
KARS-207ENST00000566560 HCN2Q9UL51 889 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 SNX12Q9UMY4 172 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 PLA2G4CQ9UP65 541 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 ERVW-1Q9UQF0 538 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 HS3ST2Q9Y278 367 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 RAD54BQ9Y620 910 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 KMT2EQ8IZD2 1858 aa11.71□□□□□ -0.53
KARS-207ENST00000566560 FAM86C2PA6NEL3 165 aa11.7□□□□□ -0.54
KARS-207ENST00000566560 PPP1R12AO14974 1030 aaPredicted RBP11.7□□□□□ -0.54
KARS-207ENST00000566560 MCF2LO15068 1137 aa11.7□□□□□ -0.54
KARS-207ENST00000566560 FANCGO15287 622 aa11.7□□□□□ -0.54
KARS-207ENST00000566560 KDELR3O43731 214 aa11.7□□□□□ -0.54
KARS-207ENST00000566560 CEP104O60308 925 aa11.7□□□□□ -0.54
KARS-207ENST00000566560 PRAMEF11O60813 436 aa11.7□□□□□ -0.54
KARS-207ENST00000566560 HNRNPLP14866 589 aaKnown RBP eCLIP11.7□□□□□ -0.54
KARS-207ENST00000566560 PRKCHP24723 683 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms