RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 METTL14Q9HCE5 456 aaKnown RBP19.02■□□□□ 0.64
TPM1-226ENST00000560959 ST7Q9NRC1 585 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 SALL4Q9UJQ4 1053 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 TBC1D30Q9Y2I9 924 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.01■□□□□ 0.63
TPM1-226ENST00000560959 EME2A4GXA9 379 aaPredicted RBP19.01■□□□□ 0.63
TPM1-226ENST00000560959 A6NNZ2 444 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 TGM2P21980 687 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 CCR1P32246 355 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 CHRNA3P32297 505 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 FMO5P49326 533 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 GCNT1Q02742 428 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 ZNF177Q13360 481 aaPredicted RBP19.01■□□□□ 0.63
TPM1-226ENST00000560959 ARL13BQ3SXY8 428 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 C3orf38Q5JPI3 329 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 CCDC81Q6ZN84 652 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 GCNT7Q6ZNI0 430 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 Q6ZSR6 202 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 CLEC14AQ86T13 490 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 CIR1Q86X95 450 aaPredicted RBP19.01■□□□□ 0.63
TPM1-226ENST00000560959 PPM1KQ8N3J5 372 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 ARL14Q8N4G2 192 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 WDR48Q8TAF3 677 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 CCDC34Q96HJ3 373 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 HDAC8Q9BY41 377 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 DNAJC28Q9NX36 388 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 ENTPD2Q9Y5L3 495 aa19.01■□□□□ 0.63
TPM1-226ENST00000560959 NYNRINQ9P2P1 1898 aaKnown RBP19.01■□□□□ 0.63
TPM1-226ENST00000560959 A0A1W2PNU3 283 aaPredicted RBP19■□□□□ 0.63
TPM1-226ENST00000560959 TPP1O14773 563 aa19■□□□□ 0.63
TPM1-226ENST00000560959 P4HA2O15460 535 aa19■□□□□ 0.63
TPM1-226ENST00000560959 CLDN11O75508 207 aa19■□□□□ 0.63
TPM1-226ENST00000560959 PRNPP04156 253 aa19■□□□□ 0.63
TPM1-226ENST00000560959 CTSLP07711 333 aa19■□□□□ 0.63
TPM1-226ENST00000560959 MYF5P13349 255 aa19■□□□□ 0.63
TPM1-226ENST00000560959 NME1P15531 152 aaKnown RBP19■□□□□ 0.63
TPM1-226ENST00000560959 PRCPP42785 496 aa19■□□□□ 0.63
TPM1-226ENST00000560959 KRT83P78385 493 aa19■□□□□ 0.63
TPM1-226ENST00000560959 CETN1Q12798 172 aa19■□□□□ 0.63
TPM1-226ENST00000560959 C5orf22Q49AR2 442 aa19■□□□□ 0.63
TPM1-226ENST00000560959 TMEM259Q4ZIN3 620 aa19■□□□□ 0.63
TPM1-226ENST00000560959 ZSCAN30Q86W11 494 aa19■□□□□ 0.63
TPM1-226ENST00000560959 SMYD4Q8IYR2 804 aaPredicted RBP19■□□□□ 0.63
TPM1-226ENST00000560959 OR2A12Q8NGT7 310 aa19■□□□□ 0.63
TPM1-226ENST00000560959 LMO3Q8TAP4 145 aa19■□□□□ 0.63
TPM1-226ENST00000560959 KLK6Q92876 244 aa19■□□□□ 0.63
TPM1-226ENST00000560959 BMFQ96LC9 184 aa19■□□□□ 0.63
TPM1-226ENST00000560959 SPATA32Q96LK8 384 aa19■□□□□ 0.63
TPM1-226ENST00000560959 RPRD1AQ96P16 312 aaPredicted RBP19■□□□□ 0.63
TPM1-226ENST00000560959 NOX5Q96PH1 765 aa19■□□□□ 0.63
TPM1-226ENST00000560959 MYOCQ99972 504 aa19■□□□□ 0.63
TPM1-226ENST00000560959 DYRK4Q9NR20 520 aa19■□□□□ 0.63
TPM1-226ENST00000560959 VPS28Q9UK41 221 aa19■□□□□ 0.63
TPM1-226ENST00000560959 ZFR2Q9UPR6 939 aaKnown RBP19■□□□□ 0.63
TPM1-226ENST00000560959 CNTN6Q9UQ52 1028 aa19■□□□□ 0.63
TPM1-226ENST00000560959 HECTD1Q9ULT8 2610 aa19■□□□□ 0.63
TPM1-226ENST00000560959 SPTY2D1-AS1A0A0U1RR47 76 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 A0A1W2PQ27 194 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 A0A1W2PQ64 194 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 H3BM21 787 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 KPNA3O00505 521 aaPredicted RBP18.99■□□□□ 0.63
TPM1-226ENST00000560959 ZNF202O95125 648 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 GLI1P08151 1106 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 SRCP12931 536 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 NUMBP49757 651 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 CLCN6P51797 869 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 CLDN2P57739 230 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 CDK17Q00537 523 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 LRRC63Q05C16 580 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 AUHQ13825 339 aaKnown RBP18.99■□□□□ 0.63
TPM1-226ENST00000560959 FZD2Q14332 565 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 ANKRD40Q6AI12 368 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 KYAT3Q6YP21 454 aaKnown RBP18.99■□□□□ 0.63
TPM1-226ENST00000560959 RBM44Q6ZP01 1051 aaKnown RBP18.99■□□□□ 0.63
TPM1-226ENST00000560959 ERN2Q76MJ5 926 aaKnown RBP18.99■□□□□ 0.63
TPM1-226ENST00000560959 ZNF548Q8NEK5 533 aaPredicted RBP18.99■□□□□ 0.63
TPM1-226ENST00000560959 OR52K2Q8NGK3 314 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 WDR36Q8NI36 951 aaKnown RBP18.99■□□□□ 0.63
TPM1-226ENST00000560959 ARRDC3Q96B67 414 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 ATXN7L3BQ96GX2 97 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 FZD3Q9NPG1 666 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 RMND1Q9NWS8 449 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 DOCK9Q9BZ29 2069 aa18.99■□□□□ 0.63
TPM1-226ENST00000560959 NEBLO76041 1014 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 PCDH8O95206 1070 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 RABIFP47224 123 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 CDH4P55283 916 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 RPS21P63220 83 aaKnown RBP18.98■□□□□ 0.63
TPM1-226ENST00000560959 PKP1Q13835 747 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 ZNF658Q5TYW1 1059 aaPredicted RBP18.98■□□□□ 0.63
TPM1-226ENST00000560959 KIAA1614Q5VZ46 1190 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 KIAA1161Q6NSJ0 714 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 PARGQ86W56 976 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 KAT5Q92993 513 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 PPP1R16AQ96I34 528 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 CCNL2Q96S94 520 aaPredicted RBP18.98■□□□□ 0.63
TPM1-226ENST00000560959 C2orf49Q9BVC5 232 aaPredicted RBP18.98■□□□□ 0.63
TPM1-226ENST00000560959 SLC17A9Q9BYT1 436 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 GTPBP4Q9BZE4 634 aaKnown RBP18.98■□□□□ 0.63
TPM1-226ENST00000560959 ASNSD1Q9NWL6 643 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms