RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 GATA6Q92908 595 aa15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 C2orf49Q9BVC5 232 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 BTBD1Q9H0C5 482 aa15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 MIR1-1HGQ9H1L0 117 aa15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 PABPC3Q9H361 631 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 SGK2Q9HBY8 427 aa15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 SLC25A13Q9UJS0 675 aa15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 IGF2RP11717 2491 aa15.55■□□□□ 0.08
SNRPA1-210ENST00000560383 A0A0D9SEW6 157 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 SPAARA0A1B0GVQ0 90 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 C1QTNF9BB2RNN3 333 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 C10orf142B7Z368 130 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 RNASEH1O60930 286 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 SEMA4FO95754 770 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 SERPING1P05155 500 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 PLEKP08567 350 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 C1QTNF9P0C862 333 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 MYBL1P10243 752 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 RHOQP17081 205 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 L1CAMP32004 1257 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 ACSL1P33121 698 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 MAPKAPK2P49137 400 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 AFF3P51826 1226 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 CST6Q15828 149 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 TMC6Q7Z403 805 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 GLRX5Q86SX6 157 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 FAM124AQ86V42 546 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 STK40Q8N2I9 435 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 MAGEB5Q9BZ81 275 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 TMEM248Q9NWD8 314 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 ADAMTS1Q9UHI8 967 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 EIF2B4Q9UI10 523 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 VPS51Q9UID3 782 aa15.54■□□□□ 0.08
SNRPA1-210ENST00000560383 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.54■□□□□ 0.081e-7■□□□□ 11.2
SNRPA1-210ENST00000560383 FAM221BA6H8Z2 402 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 ALOX15BO15296 676 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 CBFA2T2O43439 604 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 SNAP91O60641 907 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 ZMPSTE24O75844 475 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 TOP3BO95985 862 aaKnown RBP15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 MT-CO1P00395 513 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 SRCP12931 536 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 VAV1P15498 845 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 SPINK2P20155 84 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 GRIA4P48058 902 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 NUMBP49757 651 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 CLCN6P51797 869 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 GNA12Q03113 381 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 SFSWAPQ12872 951 aaKnown RBP15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 DLG2Q15700 870 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 DNAAF5Q86Y56 855 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 DRC7Q8IY82 874 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 OR7D4Q8NG98 312 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 CPLX3Q8WVH0 158 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 FAM131CQ96AQ9 280 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 TBC1D31Q96DN5 1066 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 TRIM11Q96F44 468 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 ACE2Q9BYF1 805 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 C6orf106Q9H6K1 298 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 CNOT8Q9UFF9 292 aaKnown RBP15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 FZD4Q9ULV1 537 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 FZD10Q9ULW2 581 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 MSRB2Q9Y3D2 182 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 PCDHGB2Q9Y5G2 931 aa15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 TP53BP1Q12888 1972 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-210ENST00000560383 MCF2LO15068 1137 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 HYAL3O43820 417 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 SH3BP5O60239 455 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 ADH1BP00325 375 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 DESP17661 470 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 C5AR1P21730 350 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 CASP14P31944 242 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 SLC8A1P32418 973 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 FAM193AP78312 1265 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 BNC1Q01954 994 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 SLC20A2Q08357 652 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 TRIP6Q15654 476 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 TDRD12Q587J7 1177 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 EFHC2Q5JST6 749 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 RAB44Q7Z6P3 723 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 VPS36Q86VN1 386 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 MMAAQ8IVH4 418 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 ARFGAP1Q8N6T3 406 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 ZNF653Q96CK0 615 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 TRIM7Q9C029 511 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 GAREM1Q9H706 876 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 MRPL47Q9HD33 250 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 NDFIP2Q9NV92 336 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 FBXL12Q9NXK8 326 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 ARHGAP20Q9P2F6 1191 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 SERGEFQ9UGK8 458 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 PPM1HQ9ULR3 514 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 NCKAP1Q9Y2A7 1128 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 SCINQ9Y6U3 715 aa15.52■□□□□ 0.08
SNRPA1-210ENST00000560383 TMEM131Q92545 1883 aa15.52■□□□□ 0.07
SNRPA1-210ENST00000560383 A0A087X0T9 212 aa15.51■□□□□ 0.07
SNRPA1-210ENST00000560383 EIF3CLB5ME19 914 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-210ENST00000560383 MID1O15344 667 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms