RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MED7O43513 233 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 BNIP3LO60238 219 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 LZTS3O60299 673 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 CHRNA3P32297 505 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 HNRNPKP61978 463 aaKnown RBP eCLIP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 PNOCQ13519 176 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 LY6DQ14210 128 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 ISXQ2M1V0 245 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 DENND1BQ6P3S1 775 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 ABI3BPQ7Z7G0 1075 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 TMIEQ8NEW7 156 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 MAPK15Q8TD08 544 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 CCDC97Q96F63 343 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 CCDC114Q96M63 670 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 GSDMAQ96QA5 445 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 SEMA4CQ9C0C4 833 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 FAM204AQ9H8W3 233 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 DYRK4Q9NR20 520 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 NCKIPSDQ9NZQ3 722 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 HS3ST2Q9Y278 367 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 OR51B4Q9Y5P0 310 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 DOCK9Q9BZ29 2069 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 LY6G6EA0A0G2JKS1 128 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 E5RJQ4 531 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 CLDN11O75508 207 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 PCDH8O95206 1070 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 PRNPP04156 253 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 CTSLP07711 333 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 MYF5P13349 255 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
ACTN1-221ENST00000556571 CLDN2P57739 230 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 PITX1P78337 314 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-221ENST00000556571 KRT83P78385 493 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 KCNC4Q03721 635 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 AUHQ13825 339 aaKnown RBP12.18□□□□□ -0.46
ACTN1-221ENST00000556571 GCNT7Q6ZNI0 430 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 Q6ZSR6 202 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 SLC22A18ASQ8N1D0 253 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 ATP11CQ8NB49 1132 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 OR52K2Q8NGK3 314 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 OR2A12Q8NGT7 310 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 TPCN2Q8NHX9 752 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 IFI44Q8TCB0 444 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 MED8Q96G25 268 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 SLC46A1Q96NT5 459 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 FZD3Q9NPG1 666 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 DDIT4Q9NX09 232 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 DNAJC28Q9NX36 388 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 TBC1D30Q9Y2I9 924 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 ZDHHC9Q9Y397 364 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 HS3ST3A1Q9Y663 406 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 U3KQA8 63 aa12.18□□□□□ -0.46
ACTN1-221ENST00000556571 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 TRIM49BA6NDI0 452 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 A6NNZ2 444 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 K7ENP7 123 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 SMC2O95347 1197 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 CSF2P04141 144 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 GLI1P08151 1106 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 SRCP12931 536 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 KRT5P13647 590 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 CDH4P55283 916 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 SKOR1P84550 965 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 CENPCQ03188 943 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 TAF5Q15542 800 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 CCDC40Q4G0X9 1142 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 ZNF542PQ5EBM4 170 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 C3orf38Q5JPI3 329 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 ZCCHC8Q6NZY4 707 aaKnown RBP12.17□□□□□ -0.46
ACTN1-221ENST00000556571 INO80CQ6PI98 192 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-221ENST00000556571 ERN2Q76MJ5 926 aaKnown RBP12.17□□□□□ -0.46
ACTN1-221ENST00000556571 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 DEFB106AQ8N104 65 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 ARRDC3Q96B67 414 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 CEP63Q96MT8 703 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 SLC2A13Q96QE2 648 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 C2orf49Q9BVC5 232 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-221ENST00000556571 HDAC8Q9BY41 377 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 MUC3BQ9H195 1237 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 ASNSD1Q9NWL6 643 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 VANGL2Q9ULK5 521 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 ZFR2Q9UPR6 939 aaKnown RBP12.17□□□□□ -0.46
ACTN1-221ENST00000556571 SATB2Q9UPW6 733 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 PCDHGA8Q9Y5G5 932 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 CSNK1G3Q9Y6M4 447 aa12.17□□□□□ -0.46
ACTN1-221ENST00000556571 SPTY2D1-AS1A0A0U1RR47 76 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 CPED1A4D0V7 1026 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 H3BM21 787 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 PSMA7O14818 248 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 NEBLO76041 1014 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms