RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 NOP9Q86U38 636 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 VSIG1Q86XK7 387 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 C4orf19Q8IY42 314 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 FAM71AQ8IYT1 594 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 LRRC34Q8IZ02 419 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 GPD1LQ8N335 351 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CYP2W1Q8TAV3 490 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 MDM1Q8TC05 714 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 LRRC8CQ8TDW0 803 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TMEM174Q8WUU8 243 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 FAM151AQ8WW52 585 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TCP11Q8WWU5 503 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ASB15Q8WXK1 588 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 BRI3BPQ8WY22 251 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CCT6BQ92526 530 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 SHC3Q92529 594 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 LPAR1Q92633 364 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 EXTL1Q92935 676 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ZKSCAN4Q969J2 545 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 KLHL29Q96CT2 875 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 OPTNQ96CV9 577 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CEP170P1Q96L14 293 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 MAGEB10Q96LZ2 347 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TGS1Q96RS0 853 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 UHRF1Q96T88 793 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 P2RX7Q99572 595 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 PRRX2Q99811 253 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 FOXB1Q99853 325 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 DPYSL5Q9BPU6 564 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 PAIP2Q9BPZ3 127 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CBWD1Q9BRT8 395 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 SYT11Q9BT88 431 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 MOV10L1Q9BXT6 1211 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TMEM117Q9H0C3 514 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 C12orf65Q9H3J6 166 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CXorf56Q9H5V9 222 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 LRRC19Q9H756 370 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ECT2Q9H8V3 914 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 C17orf75Q9HAS0 396 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 AGO4Q9HCK5 861 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 UBN1Q9NPG3 1134 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 RAB20Q9NX57 234 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 NOCTQ9UK39 431 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 COG5Q9UP83 839 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 SLC12A4Q9UP95 1085 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 GIT1Q9Y2X7 761 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 DOCK3Q8IZD9 2030 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 LRRC37A2A6NM11 1700 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CCL15-CCL14A0A0B4J2E2 113 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 EXOC1LA0A1B0GW35 172 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SLC12A8A0AV02 714 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CLRN2A0PK11 232 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 FAM170AA1A519 330 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 GOLGA8IPA6NC78 632 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 GOLGA8JA6NMD2 632 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SNX3O60493 162 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 HNRNPCL1O60812 293 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 H2AFYO75367 372 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TJP3O95049 919 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TTC4O95801 387 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 LDHAP00338 332 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CALB1P05937 261 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ABHD2P08910 425 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CLTAP09496 248 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 NEFHP12036 1026 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 MYCLP12524 364 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 NQO1P15559 274 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ATP2A2P16615 1042 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 KRT15P19012 456 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 MAKP20794 623 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CTGFP29279 349 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SKIV2L2P42285 1042 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 MARCKSL1P49006 195 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 VPS41P49754 854 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 GPC3P51654 580 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ITGA8P53708 1063 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 RRADP55042 308 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 INHBCP55103 352 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ELF3P78545 371 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 GTF2BQ00403 316 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CD83Q01151 205 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PPARDQ03181 441 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TAP1Q03518 808 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 MCL1Q07820 350 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CYP24A1Q07973 514 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PTP4A2Q12974 167 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TUBA3CQ13748 450 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SPARCL1Q14515 664 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 GRM7Q14831 915 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 NAA25Q14CX7 972 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 E2F5Q15329 346 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SMN1Q16637 294 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TBR1Q16650 682 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CCL15Q16663 113 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 LONRF1Q17RB8 773 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SHROOM1Q2M3G4 852 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 KLHL38Q2WGJ6 581 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TKFCQ3LXA3 575 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CCDC38Q502W7 563 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms