RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 RAB6CQ53S08 254 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 TBC1D3GQ6DHY5 549 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 TBC1D3CQ6IPX1 549 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 UNQ6494/PRO21346Q6UXR6 183 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 ZNF783Q6ZMS7 281 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 DBX2Q6ZNG2 339 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 STRADAQ7RTN6 431 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 GLRX5Q86SX6 157 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 PHF13Q86YI8 300 aaPredicted RBP14.14□□□□□ -0.15
PCNX4-209ENST00000555569 TBC1D3Q8IZP1 549 aaPredicted RBP14.14□□□□□ -0.15
PCNX4-209ENST00000555569 SKA1Q96BD8 255 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 SELENOOQ9BVL4 669 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 NAT10Q9H0A0 1025 aaKnown RBP14.14□□□□□ -0.15
PCNX4-209ENST00000555569 RAB6CQ9H0N0 254 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 KDM4CQ9H3R0 1056 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 AASDHPPTQ9NRN7 309 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 SEPT11Q9NVA2 429 aaKnown RBP14.14□□□□□ -0.15
PCNX4-209ENST00000555569 ZNF212Q9UDV6 495 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 NEUROG3Q9Y4Z2 214 aa14.14□□□□□ -0.15
PCNX4-209ENST00000555569 C1QTNF9BB2RNN3 333 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 K7ERQ8 282 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 SMAD6O43541 496 aaKnown RBP14.13□□□□□ -0.15
PCNX4-209ENST00000555569 LATO43561 262 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 PLRG1O43660 514 aaKnown RBP14.13□□□□□ -0.15
PCNX4-209ENST00000555569 DFNA5O60443 496 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 RTN2O75298 545 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 WNT1P04628 370 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 FTH1P19P0C7X4 201 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 C1QTNF9P0C862 333 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 KRT3P12035 628 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 GLDCP23378 1020 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 CD38P28907 300 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 CHRNA3P32297 505 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 ADRA1BP35368 520 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 CCT8P50990 548 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 PPP2CBP62714 309 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 PPP2CAP67775 309 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 NRG1Q02297 640 aaPredicted RBP14.13□□□□□ -0.15
PCNX4-209ENST00000555569 CNTN1Q12860 1018 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 ANO6Q4KMQ2 910 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 AGBL4Q5VU57 503 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 LINGO4Q6UY18 593 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 RAB44Q7Z6P3 723 aaPredicted RBP14.13□□□□□ -0.15
PCNX4-209ENST00000555569 PRPF39Q86UA1 669 aaKnown RBP14.13□□□□□ -0.15
PCNX4-209ENST00000555569 CHCHD4Q8N4Q1 142 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 RHBDD1Q8TEB9 315 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 CENPIQ92674 756 aaPredicted RBP14.13□□□□□ -0.15
PCNX4-209ENST00000555569 SERAC1Q96JX3 654 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 CDC6Q99741 560 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 AGPAT1Q99943 283 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 SPON2Q9BUD6 331 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 OSBPL2Q9H1P3 480 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 OR12D3Q9UGF7 316 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 KLK13Q9UKR3 277 aa14.13□□□□□ -0.15
PCNX4-209ENST00000555569 A0A1W2PR77 199 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 CBX4O00257 560 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 PCDHGA12O60330 932 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 ZMPSTE24O75844 475 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 CTSLP07711 333 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 FERP16591 822 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 GPD1P21695 349 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 RFC1P35251 1148 aaPredicted RBP14.12□□□□□ -0.15
PCNX4-209ENST00000555569 NUDT1P36639 197 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 RECQLP46063 649 aaPredicted RBP14.12□□□□□ -0.15
PCNX4-209ENST00000555569 HDAC4P56524 1084 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 GNA12Q03113 381 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 SLC20A2Q08357 652 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 SLC45A4Q5BKX6 768 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 MANEALQ5VSG8 457 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 NAPEPLDQ6IQ20 393 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 RETSATQ6NUM9 610 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 C22orf39Q6P5X5 142 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 WDR59Q6PJI9 974 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 MON1BQ7L1V2 547 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 DRC7Q8IY82 874 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 C3orf20Q8ND61 904 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 TMIEQ8NEW7 156 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 OR2A12Q8NGT7 310 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 BAHD1Q8TBE0 780 aaPredicted RBP14.12□□□□□ -0.15
PCNX4-209ENST00000555569 FAM172AQ8WUF8 416 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 ADAMTS14Q8WXS8 1223 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 GATA6Q92908 595 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 BPIFA3Q9BQP9 254 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 TMEM121BQ9BXQ6 578 aaPredicted RBP14.12□□□□□ -0.15
PCNX4-209ENST00000555569 ATP13A1Q9HD20 1204 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 APOBEC2Q9Y235 224 aaKnown RBP14.12□□□□□ -0.15
PCNX4-209ENST00000555569 BTBD3Q9Y2F9 522 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 MSRB2Q9Y3D2 182 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 TRPM6Q9BX84 2022 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 FRYQ5TBA9 3013 aa14.12□□□□□ -0.15
PCNX4-209ENST00000555569 PTPRBP23467 1997 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 A0A1B0GTQ1 180 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 SIGLEC16A6NMB1 481 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 SMTNL1A8MU46 457 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 KPNA3O00505 521 aaPredicted RBP14.11□□□□□ -0.15
PCNX4-209ENST00000555569 WNT9AO14904 365 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 TEX33O43247 280 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 KRT37O76014 449 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 PRNPP04156 253 aa14.11□□□□□ -0.15
PCNX4-209ENST00000555569 CCDC172P0C7W6 258 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms