RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SIX1Q15475 284 aaPredicted RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 TBCCQ15814 346 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 PDK4Q16654 411 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 GSTA3Q16772 222 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 USH1GQ495M9 461 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 CEP55Q53EZ4 464 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 FAM133BQ5BKY9 247 aaKnown RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ANKRD20A2Q5SQ80 823 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 MROH9Q5TGP6 573 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ANKRD20A1Q5TYW2 823 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 LRRC38Q5VT99 294 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ANKRD20A3Q5VUR7 823 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 USP17L6PQ6QN14 398 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 VSTM1Q6UX27 236 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 C1QL4Q86Z23 238 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 RHOT1Q8IXI2 618 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 KATNAL2Q8IYT4 538 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 EXD1Q8NHP7 514 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 SLC7A14Q8TBB6 771 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 PIGOQ8TEQ8 1089 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 AGAP11Q8TF27 550 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 PSPC1Q8WXF1 523 aaKnown RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 PTPRN2Q92932 1015 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF653Q96CK0 615 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ARHGEF26Q96DR7 871 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 DTNBP1Q96EV8 351 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 NAF1Q96HR8 494 aaKnown RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 FAXDC2Q96IV6 333 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 RBM41Q96IZ5 413 aaKnown RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 NT5C1BQ96P26 610 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 SMC6Q96SB8 1091 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 SYT3Q9BQG1 590 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 GOLPH3Q9H4A6 298 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 TLE6Q9H808 572 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ERVK-5Q9HDB9 667 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 KCNK9Q9NPC2 374 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 UBE2TQ9NPD8 197 aaPredicted RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 FGFR1OP2Q9NVK5 253 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 TCEAL9Q9UHQ7 104 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 SHOC2Q9UQ13 582 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 DRG1Q9Y295 367 aaKnown RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 IGSF9BQ9UPX0 1349 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF318Q5VUA4 2279 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-203ENST00000554264 GSTTP1A0A1W2PQM5 241 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 C17orf102A2RUQ5 167 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 LRRD1A4D1F6 860 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TCAF2A6NFQ2 919 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 DBX1A6NMT0 343 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 A8MXQ7 604 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FAM86B1E9PN63 330 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CLIC2O15247 247 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CCDC22O60826 627 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 SPAG6O75602 509 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 NEBLO76041 1014 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 SLITRK3O94933 977 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TJP3O95049 919 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TGDSO95455 350 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 NPTXRO95502 500 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FAM86B2P0C5J1 330 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 PYGMP11217 842 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CYP11B1P15538 503 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FGFR4P22455 802 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 SFNP31947 248 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 BMPR1AP36894 532 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ADCY8P40145 1251 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 SLC6A11P48066 632 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 IFNAR2P48551 515 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 NDUFV1P49821 464 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CYP2J2P51589 502 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ZXDAP98168 799 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 GHRHRQ02643 423 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 DLX2Q07687 328 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-203ENST00000554264 SIGLEC14Q08ET2 396 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ADAM15Q13444 863 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TRIP12Q14669 1992 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TAF11Q15544 211 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ARHGAP44Q17R89 818 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 KLHL38Q2WGJ6 581 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CBWD6Q4V339 395 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CBWD3Q5JTY5 395 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CBWD5Q5RIA9 395 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ARHGEF16Q5VV41 709 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FAM91A1Q658Y4 838 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 IRGCQ6NXR0 463 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 XRRA1Q6P2D8 792 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TTC27Q6P3X3 843 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 B3GNT9Q6UX72 402 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 CENPUQ71F23 418 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 RCOR2Q8IZ40 523 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ARHGAP18Q8N392 663 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 PPFIBP2Q8ND30 876 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FBXL13Q8NEE6 735 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 LRRC8CQ8TDW0 803 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ZFAND2BQ8WV99 257 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ATOH1Q92858 354 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ATP6V0A1Q93050 837 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 STAMBPL1Q96FJ0 436 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 SPATA33Q96N06 139 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TRAPPC9Q96Q05 1148 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms