RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 OR12D3Q9UGF7 316 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 HPCAL4Q9UM19 191 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 NCKAP1Q9Y2A7 1128 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 RAD54BQ9Y620 910 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 GPC6Q9Y625 555 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 MUC6Q6W4X9 2439 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 TRIOO75962 3097 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 A0A087X0T9 212 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 TMEM191CA6NGB0 347 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 DRGXA6NNA5 263 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 WASH3PC4AMC7 463 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 MYO1FO00160 1098 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 EIF1AYO14602 144 aaKnown RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ST8SIA5O15466 376 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 AP5Z1O43299 807 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 CREB3O43889 395 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 FOXD2O60548 495 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 DNTTP04053 509 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 RETP07949 1114 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 FAM228BP0C875 321 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 OXTRP30559 389 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 HNRNPH3P31942 346 aaKnown RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 HTR7P34969 479 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 RECQLP46063 649 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 MAPKAPK2P49137 400 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF135P52742 658 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 PLK1P53350 603 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ADKP55263 362 aaKnown RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 HDAC4P56524 1084 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 NRG1Q02297 640 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 SLC18A3Q16572 532 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 LPAL2Q16609 132 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 FUT11Q495W5 492 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 C5orf22Q49AR2 442 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 FSCBQ5H9T9 825 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 OTUD1Q5VV17 481 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 E4F1Q66K89 784 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 RNF43Q68DV7 783 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 IL31Q6EBC2 164 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 TRNP1Q6NT89 227 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF783Q6ZMS7 281 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 LPCAT2Q7L5N7 544 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 TFAP2DQ7Z6R9 452 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 KIAA0907Q7Z7F0 614 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 C14orf80Q86SX3 495 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ADIPOR2Q86V24 386 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 OR2T3Q8NH03 318 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ERLEC1Q96DZ1 483 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 MRFAP1L1Q96HT8 127 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 LOXL4Q96JB6 756 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 FRMD6Q96NE9 622 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-209ENST00000553855 SPON2Q9BUD6 331 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 RBSNQ9H1K0 784 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 MPP6Q9NZW5 540 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 CALCOCO1Q9P1Z2 691 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 CTTNBP2NLQ9P2B4 639 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ARHGAP20Q9P2F6 1191 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 ERVW-1Q9UQF0 538 aa8.55□□□□□ -1.04
PSEN1-209ENST00000553855 EDDM13A0A1B0GTR0 161 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 A0A1W2PQF6 199 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 TCRBV5S1A1TA0A578 114 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ILVBLA1L0T0 632 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 TARSL2A2RTX5 802 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 EEF2KO00418 725 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 FGF10O15520 208 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SPINT1O43278 529 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 RAMP2O60895 175 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 CNTN5O94779 1100 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 AVPP01185 164 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 HLA-EP13747 358 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 RHOQP17081 205 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 GABRG2P18507 467 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 PRKCHP24723 683 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 EPHB2P29323 1055 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 L1CAMP32004 1257 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 CYLC1P35663 651 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ARL4AP40617 200 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 P2RY2P41231 377 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 DHPSP49366 369 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF75DP51815 510 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 GALCP54803 685 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 GEMIN4P57678 1058 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 TPI1P60174 286 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 RPL6Q02878 288 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ZBTB16Q05516 673 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 GFPT1Q06210 699 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SLC20A2Q08357 652 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 CCDC15Q0P6D6 951 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SCAPQ12770 1279 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ENPP2Q13822 863 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SPA17Q15506 151 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 BOLA3Q53S33 107 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms