RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 ZNF410Q86VK4 478 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 DENND6AQ8IWF6 608 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 DRAXINQ8NBI3 349 aaPredicted RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 TRAPPC9Q96Q05 1148 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 SIK2Q9H0K1 926 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 ZDHHC2Q9UIJ5 367 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 H3BNX3 289 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 MT-CYBP00156 380 aaPredicted RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 ATP5BP06576 529 aaKnown RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 UQCRBP14927 111 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 PTPN1P18031 435 aaKnown RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 XRCC1P18887 633 aaPredicted RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 GJA5P36382 358 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 IL31Q6EBC2 164 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 RWDD4Q6NW29 188 aaKnown RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 ARHGAP36Q6ZRI8 547 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 RPS27LQ71UM5 84 aaKnown RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 SATL1Q86VE3 508 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 ST13P4Q8IZP2 240 aaPredicted RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 TMA16Q96EY4 203 aaKnown RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 ZNF560Q96MR9 790 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 FTHL17Q9BXU8 183 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 ILKAPQ9H0C8 392 aaPredicted RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 TLK1Q9UKI8 766 aa17.23■□□□□ 0.35
SEC23A-203ENST00000545328 RUVBL2Q9Y230 463 aaKnown RBP17.23■□□□□ 0.35
SEC23A-203ENST00000545328 CDK7P50613 346 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 AFF1P51825 1210 aaKnown RBP17.22■□□□□ 0.35
SEC23A-203ENST00000545328 CCNA1P78396 465 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 MPP1Q00013 466 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
SEC23A-203ENST00000545328 PAFAH1B3Q15102 231 aaKnown RBP17.22■□□□□ 0.35
SEC23A-203ENST00000545328 LIN52Q52LA3 116 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 C1QTNF12Q5T7M4 302 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 ACAD11Q709F0 780 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 RNF34Q969K3 372 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 DFFAO00273 331 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 ALOX15P16050 662 aaPredicted RBP17.22■□□□□ 0.35
SEC23A-203ENST00000545328 MTTPP55157 894 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 FOLH1Q04609 750 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 GK3PQ14409 553 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 PDK3Q15120 406 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 ZNF792Q3KQV3 632 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 ALKAL1Q6UXT8 129 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 TMEM135Q86UB9 458 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 GALNT4Q8N4A0 578 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 ICA1LQ8NDH6 482 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 SUDS3Q9H7L9 328 aaPredicted RBP17.22■□□□□ 0.35
SEC23A-203ENST00000545328 COPS7BQ9H9Q2 264 aaPredicted RBP17.22■□□□□ 0.35
SEC23A-203ENST00000545328 DTNAQ9Y4J8 743 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 SBF1O95248 1867 aa17.22■□□□□ 0.35
SEC23A-203ENST00000545328 ALDH1A3P47895 512 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 DBN1Q16643 649 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
SEC23A-203ENST00000545328 SEL1L3Q68CR1 1132 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 RNF135Q8IUD6 432 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 DSELQ8IZU8 1212 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 IPMKQ8NFU5 416 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 RCOR3Q9P2K3 495 aaPredicted RBP17.21■□□□□ 0.35
SEC23A-203ENST00000545328 DERAQ9Y315 318 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 MYBPHLA2RUH7 354 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 NEMP2A6NFY4 417 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 CD4P01730 458 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 SMIM10L2AP0DMW4 78 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 SMIM10L2BP0DMW5 78 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 DARSP14868 501 aaKnown RBP17.21■□□□□ 0.35
SEC23A-203ENST00000545328 CYP2B6P20813 491 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 NAB1Q13506 487 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 FLOT2Q14254 428 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 DGKDQ16760 1214 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 TMC7Q7Z402 723 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 SREK1Q8WXA9 508 aaKnown RBP17.21■□□□□ 0.35
SEC23A-203ENST00000545328 NPAS2Q99743 824 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 COL1A2P08123 1366 aa17.21■□□□□ 0.35
SEC23A-203ENST00000545328 VAPBO95292 243 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 MT-CO1P00395 513 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 FAM200BP0CF97 657 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 YBX3P16989 372 aaKnown RBP eCLIP17.2■□□□□ 0.347e-8■□□□□ 8.2
SEC23A-203ENST00000545328 SV2CQ496J9 727 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 TWF2Q6IBS0 349 aaKnown RBP17.2■□□□□ 0.34
SEC23A-203ENST00000545328 JADE3Q92613 823 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 NMD3Q96D46 503 aaKnown RBP17.2■□□□□ 0.34
SEC23A-203ENST00000545328 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
SEC23A-203ENST00000545328 SPATA16Q9BXB7 569 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 TKTL2Q9H0I9 626 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 FAM96AQ9H5X1 160 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 CYP4F12Q9HCS2 524 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 WDR6Q9NNW5 1121 aaKnown RBP17.2■□□□□ 0.34
SEC23A-203ENST00000545328 VTA1Q9NP79 307 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 CASS4Q9NQ75 786 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 OXSMQ9NWU1 459 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 CLIC5Q9NZA1 410 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 XPR1Q9UBH6 696 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 APPL1Q9UKG1 709 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 TREHO43280 583 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 SBK3P0C264 359 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 MYL4P12829 197 aa17.2■□□□□ 0.34
SEC23A-203ENST00000545328 ATP6V1B1P15313 513 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms