RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ZSCAN23Q3MJ62 389 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 PARP15Q460N3 678 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CCDC14Q49A88 953 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 SETMARQ53H47 684 aaPredicted RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 BOLA3Q53S33 107 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CFAP58Q5T655 872 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 ERMARDQ5T6L9 678 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 PEAR1Q5VY43 1037 aaPredicted RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 SPECC1LQ69YQ0 1117 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 TBC1D3GQ6DHY5 549 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 TBC1D3CQ6IPX1 549 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 KIAA1211LQ6NV74 962 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 DPY19L2P1Q6NXN4 242 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 MON1BQ7L1V2 547 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 ARMCX6Q7L4S7 300 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 TMC6Q7Z403 805 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 PDZD3Q86UT5 571 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 LUZP1Q86V48 1076 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 FAM131BQ86XD5 332 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 LRRC49Q8IUZ0 686 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CNGA4Q8IV77 575 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 MMAAQ8IVH4 418 aaKnown RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 MAP7D3Q8IWC1 876 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 SFTPA1Q8IWL2 248 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 PLPP6Q8IY26 295 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 TBC1D3Q8IZP1 549 aaPredicted RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 TXLNBQ8N3L3 684 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 OXR1Q8N573 874 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 PAF1Q8N7H5 531 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 OR8K1Q8NGG5 319 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 OR14C36Q8NHC7 312 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 SLC20A1Q8WUM9 679 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 SORCS1Q8WY21 1168 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 DNASE2BQ8WZ79 361 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CENPIQ92674 756 aaPredicted RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 ISG20Q96AZ6 181 aaKnown RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 ZNF653Q96CK0 615 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 FEM1CQ96JP0 617 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 RPL10LQ96L21 214 aaKnown RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 PRICKLE1Q96MT3 831 aaPredicted RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 MCEEQ96PE7 176 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CDC6Q99741 560 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 SPON2Q9BUD6 331 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 GTPBP2Q9BX10 602 aaKnown RBP5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 C1QTNF7Q9BXJ2 289 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 OSBPL1AQ9BXW6 950 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 HAUS4Q9H6D7 363 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CBX8Q9HC52 389 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 PREBQ9HCU5 417 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 EVA1BQ9NVM1 165 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 ADAMTS1Q9UHI8 967 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CLEC4EQ9ULY5 219 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 CAPN11Q9UMQ6 739 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 DMTF1Q9Y222 760 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 HS3ST2Q9Y278 367 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 SHROOM3Q8TF72 1996 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 TENM4Q6N022 2769 aa5.74□□□□□ -1.49
CLSTN3-215ENST00000544584 ZNF462Q96JM2 2506 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 LNP1A1A4G5 178 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 FAM47DPA6NHR8 397 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 C4orf47A7E2U8 309 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 TTC34A8MYJ7 566 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 KPNA3O00505 521 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 NEMP1O14524 444 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 TEX33O43247 280 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 CREB3O43889 395 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 AKR1B10O60218 316 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 BNIP3LO60238 219 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 SIN3BO75182 1162 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 NEBLO76041 1014 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 FSBPO95073 299 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 IPO7O95373 1038 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 POP4O95707 220 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 C7P10643 843 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 ENGP17813 658 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 BCKDHBP21953 392 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 ITPKAP23677 461 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 MZF1P28698 734 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 CHRNA3P32297 505 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 RFC1P35251 1148 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 PCK1P35558 622 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 PTGER3P43115 390 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 PSMD8P48556 350 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 DNA2P51530 1060 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 RENBPP51606 427 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 SUOXP51687 545 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 SGSHP51688 502 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 COPAP53621 1224 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 TPI1P60174 286 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 RPS14P62263 151 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 IRX4P78413 519 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 SGCGQ13326 291 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 STAT4Q14765 748 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 IQCB1Q15051 598 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 SF3A2Q15428 464 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 PTPRNQ16849 979 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 UAP1L1Q3KQV9 507 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 INO80DQ53TQ3 878 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 FSCBQ5H9T9 825 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 PPP1R15BQ5SWA1 713 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms