RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 CDCP2Q5VXM1 449 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 KDM7AQ6ZMT4 941 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 ELOA2Q8IYF1 753 aaPredicted RBP8.33□□□□□ -1.08
CD4-209ENST00000539492 SLC25A45Q8N413 288 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 ZNF248Q8NDW4 579 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 IFT43Q96FT9 208 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 ZNF578Q96N58 590 aaPredicted RBP8.33□□□□□ -1.08
CD4-209ENST00000539492 NOX5Q96PH1 765 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 DEPDC7Q96QD5 511 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 CPXM1Q96SM3 734 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 LGMNQ99538 433 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 MYOCQ99972 504 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 C2orf49Q9BVC5 232 aaPredicted RBP8.33□□□□□ -1.08
CD4-209ENST00000539492 MUC3BQ9H195 1237 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 USP29Q9HBJ7 922 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 UBE2TQ9NPD8 197 aaPredicted RBP8.33□□□□□ -1.08
CD4-209ENST00000539492 DYRK4Q9NR20 520 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 EVA1BQ9NVM1 165 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 NLGN3Q9NZ94 848 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 VANGL2Q9ULK5 521 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 CTNND2Q9UQB3 1225 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 HS3ST2Q9Y278 367 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 TBC1D30Q9Y2I9 924 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.33□□□□□ -1.08
CD4-209ENST00000539492 OR51B4Q9Y5P0 310 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 HS3ST4Q9Y661 456 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 ANKRD36A6QL64 1941 aa8.33□□□□□ -1.08
CD4-209ENST00000539492 CAPN8A6NHC0 703 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ERVH48-1M5A8F1 160 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 KPNA3O00505 521 aaPredicted RBP8.32□□□□□ -1.08
CD4-209ENST00000539492 SLC31A1O15431 190 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 FFAR2O15552 330 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 BNIP3LO60238 219 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 OPA1O60313 960 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 PAGE1O75459 146 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 DAB1O75553 588 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 GRAP2O75791 330 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
CD4-209ENST00000539492 ZIC2O95409 532 aaPredicted RBP8.32□□□□□ -1.08
CD4-209ENST00000539492 PRNPP04156 253 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 GP1BAP07359 652 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 RHOCP08134 193 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 CKMT1AP12532 417 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 SRCP12931 536 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 PLA2G2AP14555 144 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 CHRNA3P32297 505 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 GGCXP38435 758 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 DUSP3P51452 185 aaPredicted RBP8.32□□□□□ -1.08
CD4-209ENST00000539492 CLCN6P51797 869 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 UCNP55089 124 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 SNX16P57768 344 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 CXADRP78310 365 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 KRT83P78385 493 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 PAK1Q13153 545 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ZNF284Q2VY69 593 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ISM2Q6H9L7 571 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 C11orf57Q6ZUT1 292 aaPredicted RBP8.32□□□□□ -1.08
CD4-209ENST00000539492 SLC26A9Q7LBE3 791 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ABI3BPQ7Z7G0 1075 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 LSMEM2Q8N112 164 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ZNF843Q8N446 348 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 FAM181AQ8N9Y4 354 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ATP11CQ8NB49 1132 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 TMIEQ8NEW7 156 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 OR52K2Q8NGK3 314 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 FAM174AQ8TBP5 190 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 KLK6Q92876 244 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ARRDC3Q96B67 414 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 PPP1R13BQ96KQ4 1090 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 PSMB7Q99436 277 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 DUSP23Q9BVJ7 150 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 CALN1Q9BXU9 219 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 FZD3Q9NPG1 666 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 ACP6Q9NPH0 428 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 UCKL1Q9NWZ5 548 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 RRN3Q9NYV6 651 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 VPS51Q9UID3 782 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 PCDHGC3Q9UN70 934 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 PCDHB1Q9Y5F3 818 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 BSNQ9UPA5 3926 aa8.32□□□□□ -1.08
CD4-209ENST00000539492 LRP4O75096 1905 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 NEMP2A6NFY4 417 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 A6NNZ2 444 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 BECN2A8MW95 431 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 PPP1R3GB7ZBB8 358 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 LZTS3O60299 673 aaPredicted RBP8.31□□□□□ -1.08
CD4-209ENST00000539492 SNAP91O60641 907 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 PCDH8O95206 1070 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 FGFR1OPO95684 399 aaKnown RBP8.31□□□□□ -1.08
CD4-209ENST00000539492 MT-CO1P00395 513 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 GIMD1P0DJR0 217 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 RRM1P23921 792 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 NOS2P35228 1153 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 USP8P40818 1118 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 RECQLP46063 649 aaPredicted RBP8.31□□□□□ -1.08
CD4-209ENST00000539492 LSSP48449 732 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 STX17P56962 302 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 TMPRSS3P57727 454 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 ERVPABLB-1P60509 514 aa8.31□□□□□ -1.08
CD4-209ENST00000539492 HNRNPKP61978 463 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms