RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SH3GL1Q99961 368 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 COMMD8Q9NX08 183 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 SAGE1Q9NXZ1 904 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 ZMYM5Q9UJ78 669 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 A0A1W2PPM1 405 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 IMPDH2P12268 514 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 OTOP2Q7RTS6 562 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 SLC41A1Q8IVJ1 513 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 METTL6Q8TCB7 284 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 PHF21AQ96BD5 680 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 RNF145Q96MT1 663 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 MMADHCQ9H3L0 296 aaPredicted RBP14.75□□□□□ -0.05
CACNB1-206ENST00000539338 DDX18Q9NVP1 670 aaKnown RBP14.75□□□□□ -0.05
CACNB1-206ENST00000539338 RBAK-RBAKDNI3L0D1 243 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 NOL4O94818 638 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 YWHAQP27348 245 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 RFX3P48380 749 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 CAMK2GQ13555 558 aaPredicted RBP14.75□□□□□ -0.05
CACNB1-206ENST00000539338 BBS12Q6ZW61 710 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 BTN2A2Q8WVV5 523 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 RMND5BQ96G75 393 aaPredicted RBP14.75□□□□□ -0.05
CACNB1-206ENST00000539338 VAT1Q99536 393 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 ELOVL4Q9GZR5 314 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 CCDC154A6NI56 674 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 BUD23O43709 281 aaKnown RBP14.75□□□□□ -0.05
CACNB1-206ENST00000539338 FGFR3P22607 806 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 SCARA3Q6AZY7 606 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 NEPROQ6NW34 567 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 CCDC103Q8IW40 242 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 IQCKQ8N0W5 287 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 C12orf29Q8N999 325 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 VPS33AQ96AX1 596 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 SPG21Q9NZD8 308 aa14.75□□□□□ -0.05
CACNB1-206ENST00000539338 TP53BP2Q13625 1128 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 FAM98BQ52LJ0 330 aaKnown RBP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 BNIPLQ7Z465 357 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 HERC6Q8IVU3 1022 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 FAM126BQ8IXS8 530 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 CERS2Q96G23 380 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 MPP4Q96JB8 637 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 CIPCQ9C0C6 399 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 TUBGCP4Q9UGJ1 667 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 SLIT2O94813 1529 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 CLOCKO15516 846 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 SYN1P17600 705 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 SLC44A4Q53GD3 710 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 BHLHE22Q8NFJ8 381 aaPredicted RBP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 DCUN1D5Q9BTE7 237 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 TMEM245Q9H330 911 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 DDX3YO15523 660 aaKnown RBP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 GOT1P17174 413 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 MTA1Q13330 715 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 CRY2Q49AN0 593 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 EEF1DP3Q658K8 133 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 PIGZQ86VD9 579 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 FAM9CQ8IZT9 166 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 EFCAB3Q8N7B9 438 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 PDGFDQ9GZP0 370 aaPredicted RBP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 ALG9Q9H6U8 611 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 BRD9Q9H8M2 597 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 SALL4Q9UJQ4 1053 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 ROBO3Q96MS0 1386 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 SRRM3A6NNA2 597 aaPredicted RBP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 GLUD1P00367 558 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 KRT6AP02538 564 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 KRT6BP04259 564 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 ABCB1P08183 1280 aaPredicted RBP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 HSMCR30P0CW71 290 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 NFKB1P19838 968 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 MMP13P45452 471 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 KRT6CP48668 564 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 RAD23AP54725 363 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 PLEKHM3Q6ZWE6 761 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 RASAL3Q86YV0 1011 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 LGMNQ99538 433 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 C1QTNF7Q9BXJ2 289 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 IL22Q9GZX6 179 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 SEMA4BQ9NPR2 832 aaPredicted RBP14.74□□□□□ -0.05
CACNB1-206ENST00000539338 TMCC3Q9ULS5 477 aa14.74□□□□□ -0.05
CACNB1-206ENST00000539338 SEC22BO75396 215 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 RASSF9O75901 435 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 GSSP48637 474 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 WASHC5Q12768 1159 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 UBAP2LQ14157 1087 aaKnown RBP14.73□□□□□ -0.05
CACNB1-206ENST00000539338 NEDD8Q15843 81 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 CCDC92Q53HC0 331 aaPredicted RBP14.73□□□□□ -0.05
CACNB1-206ENST00000539338 UNC93AQ86WB7 457 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 WDR41Q9HAD4 459 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 TSC22D4Q9Y3Q8 395 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 DYRK1BQ9Y463 629 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 A8MX80 341 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 KRT36O76013 467 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 RRM2P31350 389 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 SCNN1GP51170 649 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 ZNF280AP59817 542 aaPredicted RBP14.73□□□□□ -0.05
CACNB1-206ENST00000539338 NRF1Q16656 503 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 IRGCQ6NXR0 463 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 FOXR2Q6PJQ5 311 aa14.73□□□□□ -0.05
CACNB1-206ENST00000539338 STK32CQ86UX6 486 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms