RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PDZK1Q5T2W1 519 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 STK32CQ86UX6 486 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 ITFG1Q8TB96 612 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 ATAD3AQ9NVI7 634 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 GALNT8Q9NY28 637 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 KLQ9UEF7 1012 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 COQ6Q9Y2Z9 468 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 FCHO1O14526 889 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 CD3EAPO15446 510 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 TBC1D12O60347 775 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 LBPP18428 481 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 ZC3H12AQ5D1E8 599 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 SERPINA13PQ6UXR4 307 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 ZNF605Q86T29 641 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 GINS4Q9BRT9 223 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 OXCT2Q9BYC2 517 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 RNPEPQ9H4A4 650 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 DDX4Q9NQI0 724 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 CCDC167Q9P0B6 97 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 SAE1Q9UBE0 346 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 FZD1Q9UP38 647 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 TRIM43BA6NCK2 446 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 GJB6O95452 261 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 TSPAN19P0C672 248 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 CHKAP35790 457 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 FAAP100Q0VG06 881 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 FAM187BQ17R55 369 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 DACT2Q5SW24 774 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 NEPROQ6NW34 567 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 FIBCD1Q8N539 461 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 SELENOMQ8WWX9 145 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 ATL1Q8WXF7 558 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 FUT8Q9BYC5 575 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 MIR1-1HGQ9H1L0 117 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 TPRKBQ9Y3C4 175 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 CD86P42081 329 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 CLK3P49761 638 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 FKBP1AP62942 108 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 HSPA14Q0VDF9 509 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 TCEA2Q15560 299 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 PSTKQ8IV42 348 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 SLC25A23Q9BV35 468 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 DMGDHQ9UI17 866 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 ZNF232Q9UNY5 417 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 TEX28O15482 410 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 TRUB2O95900 331 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 SMIM10L2AP0DMW4 78 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 SMIM10L2BP0DMW5 78 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 PRKAG1P54619 331 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 RNF44Q7L0R7 432 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 C18orf25Q96B23 403 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 MTMR8Q96EF0 704 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 L2HGDHQ9H9P8 463 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 RNF19AQ9NV58 838 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 ETNK2Q9NVF9 386 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 SNX6Q9UNH7 406 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 AP3M1Q9Y2T2 418 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 NPR3P17342 541 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 FRG1Q14331 258 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 DSELQ8IZU8 1212 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 NKAPQ8N5F7 415 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 IL22Q9GZX6 179 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 AASDHPPTQ9NRN7 309 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 CDH9Q9ULB4 789 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 TNS2Q63HR2 1409 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 BCORL1Q5H9F3 1711 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 EML1O00423 815 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 KPNA5O15131 536 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 CLOCKO15516 846 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 TBL1XO60907 577 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 KCNH1O95259 989 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 FGRP09769 529 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 KDELR1P24390 212 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 CRATP43155 626 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 ZNF57Q68EA5 555 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 FAIM2Q9BWQ8 316 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 ATP13A3Q9H7F0 1226 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 MRPL39Q9NYK5 338 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 ZNHIT2Q9UHR6 403 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 ITGA1P56199 1179 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 NOMO2Q5JPE7 1267 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 GJC2Q5T442 439 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 PRR23CQ6ZRP0 262 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 STAG3L4Q8TBR4 150 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 TBCDQ9BTW9 1192 aa18.41■□□□□ 0.54
SFSWAP-203ENST00000535236 CSH1P0DML2 217 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 CSH2P0DML3 217 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 PSEN1P49768 467 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 SLC12A3P55017 1021 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 STXBP5Q5T5C0 1151 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 FKBP1CQ5VVH2 108 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 LLGL2Q6P1M3 1020 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 DENND1CQ8IV53 801 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 COPG2Q9UBF2 871 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 TMCO1Q9UM00 188 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 PHGDHO43175 533 aaKnown RBP18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 OR6B1O95007 311 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 SNX32Q86XE0 403 aa18.4■□□□□ 0.54
SFSWAP-203ENST00000535236 KATNAL2Q8IYT4 538 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms